RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
RABGGTA-221ENST00000561055 C20orf24Q9BUV8 137 aa7.26□□□□□ -1.25
RABGGTA-221ENST00000561055 SLC25A31Q9H0C2 315 aa7.26□□□□□ -1.25
RABGGTA-221ENST00000561055 OR5AC2Q9NZP5 309 aa7.26□□□□□ -1.25
RABGGTA-221ENST00000561055 LSM4Q9Y4Z0 139 aaKnown RBP7.26□□□□□ -1.25
RABGGTA-221ENST00000561055 IGHV3OR16-8A0A075B7F1 116 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 IZUMO1RA6ND01 250 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 TSPAN4O14817 238 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 ZNF207O43670 478 aaKnown RBP7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 CST7O76096 145 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 GP9P14770 177 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 BCAP31P51572 246 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 PLP1P60201 277 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 SELENOTP62341 195 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 HBG1P69891 147 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 HBG2P69892 147 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 ZNF90Q03938 601 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 SLC38A11Q08AI6 406 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 USF2Q15853 346 aaPredicted RBP7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 LRRC37A5PQ49AS3 106 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 TEPPQ6URK8 271 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 BTNL8Q6UX41 500 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 STX12Q86Y82 276 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 CHAC2Q8WUX2 184 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 METTL26Q96S19 204 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 RHPN1-AS1Q9BWJ2 59 aa7.25□□□□□ -1.25
RABGGTA-221ENST00000561055 A0A1W2PS18 150 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 K7EIL1 84 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 IL4P05112 153 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 HNRNPCP07910 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 GIPP09681 153 aaPredicted RBP7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 BMI1P35226 326 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 RAP2BP61225 183 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 NHLH2Q02577 135 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 AKR1C1Q04828 323 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 BAXQ07812 192 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 FGL1Q08830 312 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 LAMTOR1Q6IAA8 161 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 Q8N1Y9 231 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 RNF125Q96EQ8 232 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 RNF2Q99496 336 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 SPAG8Q99932 426 aaPredicted RBP7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 TMEM231Q9H6L2 316 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 UQCC1Q9NVA1 299 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 SLC45A2Q9UMX9 530 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
RABGGTA-221ENST00000561055 BUB3O43684 328 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 MPDU1O75352 247 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 APOHP02749 345 aaPredicted RBP7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 PRB2P02812 416 aaPredicted RBP7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 EIF2B2P49770 351 aaKnown RBP7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 EWSR1Q01844 656 aaKnown RBP eCLIP7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 C16orf54Q6UWD8 224 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 TMEM182Q6ZP80 229 aaPredicted RBP7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 CYP2G1PQ6ZSU1 146 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 LILRB2Q8N423 598 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 BPIFCQ8NFQ6 507 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 THAP6Q8TBB0 222 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 ST8SIA2Q92186 375 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 PRR25Q96S07 402 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 FAM110AQ9BQ89 295 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 TMEM147Q9BVK8 224 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 MBD2Q9UBB5 411 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 RABAC1Q9UI14 185 aa7.23□□□□□ -1.25
RABGGTA-221ENST00000561055 TRAV2A0A0B4J234 112 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 SMCO3A2RU48 225 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 A8MZ25 164 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 AGPAT2O15120 278 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 C1orf194Q5T5A4 169 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 PXDC1Q5TGL8 231 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 Q6ZNX1 250 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 TMEM217Q8N7C4 229 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 STPG3Q8N7X2 389 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 OR5C1Q8NGR4 320 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 GLMPQ8WWB7 406 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 GRAMD2BQ96HH9 432 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 NARS2Q96I59 477 aaKnown RBP7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 MGST2Q99735 147 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 PFDN2Q9UHV9 154 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 HSPB11Q9Y547 144 aa7.22□□□□□ -1.25
RABGGTA-221ENST00000561055 IGHV3-49A0A0A0MS15 119 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 G3V3Q6 166 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 RPL12P30050 165 aaKnown RBP7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 S100A7P31151 101 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 RPL29P47914 159 aaKnown RBP7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 AP2S1P53680 142 aaPredicted RBP7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 PRR20EP86478 221 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 PRR20CP86479 221 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 PRR20DP86480 221 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 PRR20BP86481 221 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 PRR20AP86496 221 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 OR2F1Q13607 317 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 RAB31Q13636 194 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 Q5BKY6 102 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 TCF24Q7RTU0 167 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 ZNF546Q86UE3 836 aa7.21□□□□□ -1.26
RABGGTA-221ENST00000561055 GTSCR1Q86UQ5 136 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms