RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 FAM74A3Q4VXF1 159 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 FAM223AQ8IWN6 122 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 ZNF355PQ9NSJ1 428 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 DOK5Q9P104 306 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 VPREB3Q9UKI3 123 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 HIGD1AQ9Y241 93 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 TRBV7-1A0A0A6YYK4 115 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 F6UZH7 168 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 CD5LO43866 347 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 OR7C2O60412 319 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 C15orf32Q32M92 178 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 FAM90A2PQ658T7 463 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 LINC00305Q7Z4B0 112 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 CLRN3Q8NCR9 226 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 Q8WTZ3 238 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
HDDC3-206ENST00000561036 WI2-2373I1.2A0A1W2PRP0 233 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 SMAD7O15105 426 aaKnown RBP13.37□□□□□ -0.27
HDDC3-206ENST00000561036 SCO1O75880 301 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 OR2C1O95371 312 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 BLCAPP62952 87 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 CST9LP1Q5W188 147 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 EEF1AKMT3Q96AZ1 226 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 NIPSNAP3BQ9BS92 247 aa13.37□□□□□ -0.27
HDDC3-206ENST00000561036 MRPL27Q9P0M9 148 aaKnown RBP13.37□□□□□ -0.27
HDDC3-206ENST00000561036 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 FAM74A7A6NL05 159 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 PPIFP30405 207 aaKnown RBP13.36□□□□□ -0.27
HDDC3-206ENST00000561036 LYZP61626 148 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 ATP5G2Q06055 141 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 ZNF491Q8N8L2 437 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 PAXXQ9BUH6 204 aa13.36□□□□□ -0.27
HDDC3-206ENST00000561036 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 H3BQ15 152 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
HDDC3-206ENST00000561036 CTSGP08311 255 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 S100A7P31151 101 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 CEBPGP53567 150 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 UBE2G2P60604 165 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 MORN5Q5VZ52 161 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 RNF125Q96EQ8 232 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 TVP23CQ96ET8 276 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 UHRF2Q96PU4 802 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 RNF24Q9Y225 148 aa13.35□□□□□ -0.27
HDDC3-206ENST00000561036 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
HDDC3-206ENST00000561036 ABCA1O95477 2261 aa13.34□□□□□ -0.27
HDDC3-206ENST00000561036 UBE2L3P68036 154 aaKnown RBP13.34□□□□□ -0.27
HDDC3-206ENST00000561036 PNRC1Q12796 327 aaPredicted RBP13.34□□□□□ -0.27
HDDC3-206ENST00000561036 RHEBQ15382 184 aa13.34□□□□□ -0.27
HDDC3-206ENST00000561036 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
HDDC3-206ENST00000561036 TMEM14CQ9P0S9 112 aa13.34□□□□□ -0.27
HDDC3-206ENST00000561036 PUS1Q9Y606 427 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDDC3-206ENST00000561036 S4R3C0 116 aa13.34□□□□□ -0.27
HDDC3-206ENST00000561036 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 ZNF727A8MUV8 499 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 M0R036 132 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 TRGV3P03979 118 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 IL4P05112 153 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 ATP5G3P48201 142 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 CFHR3Q02985 330 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 KRTAP1-1Q07627 177 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 ZNF600Q6ZNG1 722 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 MS4A10Q96PG2 267 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 SHANK2-AS3Q9BTD1 123 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 PRSS22Q9GZN4 317 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 NPFFR1Q9GZQ6 430 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 CREBBPQ92793 2442 aa13.33□□□□□ -0.28
HDDC3-206ENST00000561036 H3BRN7 92 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
HDDC3-206ENST00000561036 IGLV1-40P01703 118 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
HDDC3-206ENST00000561036 BTN1A1Q13410 526 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 AWAT1Q58HT5 328 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 Q6ZS46 218 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 C11orf52Q96A22 123 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 SMIM7Q9BQ49 75 aa13.32□□□□□ -0.28
HDDC3-206ENST00000561036 B4DEV8 164 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 CLEC3BP05452 202 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 OR10J4P0C629 311 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 HNF1AP20823 631 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 GPR183P32249 361 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 ADMP35318 185 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 NOL4LQ96MY1 436 aaPredicted RBP13.31□□□□□ -0.28
HDDC3-206ENST00000561036 TCEAL7Q9BRU2 100 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms