RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 NEBP20929 6669 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TRAV8-7A0A075B6U6 113 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 A8MTW9 85 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 F6UB75 175 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 MFNGO00587 321 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 LECT2O14960 151 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 CYB5BO43169 146 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 EDF1O60869 148 aaKnown RBP2.34□□□□□ -2.03
HERC1-211ENST00000560983 TMEM50AO95807 157 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 MT-CO2P00403 227 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TRAPPC2P0DI81 140 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TRAPPC2BP0DI82 140 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 ATP6V1E1P36543 226 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 SERPINB10P48595 397 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 MNAT1P51948 309 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 GTF2A1P52655 376 aaPredicted RBP2.34□□□□□ -2.03
HERC1-211ENST00000560983 AP2S1P53680 142 aaPredicted RBP2.34□□□□□ -2.03
HERC1-211ENST00000560983 TMEM50BP56557 158 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TAS2R43P59537 309 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 PPP3R1P63098 170 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TDRG1Q3Y452 100 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TIMM50Q3ZCQ8 353 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 ACSM3Q53FZ2 586 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 KDM4DQ6B0I6 523 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 ZNF600Q6ZNG1 722 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 TPRA1Q86W33 373 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 OR4A4PQ8NGN8 299 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 OR8J1Q8NGP2 316 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 OR10J6PQ8NGY7 276 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 RNASE8Q8TDE3 154 aaKnown RBP2.34□□□□□ -2.03
HERC1-211ENST00000560983 MOB3AQ96BX8 217 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 METTL26Q96S19 204 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 ABHD1Q96SE0 405 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 SIKE1Q9BRV8 207 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 HINT2Q9BX68 163 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 DCSTAMPQ9H295 470 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 NRN1Q9NPD7 142 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 PRR34Q9NV39 138 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 GHRLQ9UBU3 117 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 MGAT4AQ9UM21 535 aa2.34□□□□□ -2.03
HERC1-211ENST00000560983 RCL1Q9Y2P8 373 aaKnown RBP2.34□□□□□ -2.03
HERC1-211ENST00000560983 TRAV5A0A0B4J249 113 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 A0A0J9YX75 114 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 RNF222A6NCQ9 220 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 RBFOX3A6NFN3 312 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 FOXI3A8MTJ6 420 aaPredicted RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 BET1O15155 118 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 FABP7O15540 132 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 GNG7O60262 68 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 HRASP01112 189 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 ZNF182P17025 639 aaPredicted RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 DAPP51397 102 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 RORCP51449 518 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 TAS2R60P59551 318 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 B2MP61769 119 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 QRFPP83859 136 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 TMED1Q13445 227 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 POU2AF1Q16633 256 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 FFAR4Q5NUL3 377 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 KCTD9Q7L273 389 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 HSD17B13Q7Z5P4 300 aaPredicted RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 CDH26Q8IXH8 852 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 H1FOOQ8IZA3 346 aaPredicted RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 JAGN1Q8N5M9 183 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 HSD17B11Q8NBQ5 300 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 OR1P1Q8NH06 330 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 OR4S2Q8NH73 311 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 OR10J5Q8NHC4 309 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 TMEM37Q8WXS4 190 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 COMMD5Q9GZQ3 224 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 SCPEP1Q9HB40 452 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 HRASLSQ9HDD0 168 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 PLEKHJ1Q9NW61 149 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 BABAM2Q9NXR7 383 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 MRPL36Q9P0J6 103 aaKnown RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 RBMX2Q9Y388 322 aaKnown RBP2.33□□□□□ -2.04
HERC1-211ENST00000560983 PRELID3BQ9Y3B1 194 aa2.33□□□□□ -2.04
HERC1-211ENST00000560983 TRAV12-2A0A075B6T6 113 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 TEX13DA0A0J9YY54 714 aaPredicted RBP2.32□□□□□ -2.04
HERC1-211ENST00000560983 J3QRK9 145 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 M0R2Z0 102 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 SOCS3O14543 225 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 OGG1O15527 345 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
HERC1-211ENST00000560983 DIRAS3O95661 229 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 HLA-DQB1P01920 261 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 CD2P06729 351 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 UCP1P25874 307 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 DCKP27707 260 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 ETV6P41212 452 aa2.32□□□□□ -2.04
HERC1-211ENST00000560983 EIF2B2P49770 351 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms