RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 C19orf54Q5BKX5 351 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 STXBP6Q8NFX7 210 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 RPUSD4Q96CM3 377 aaKnown RBP10.12□□□□□ -0.79
SNX1-211ENST00000560829 UHRF2Q96PU4 802 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 TXN2Q99757 166 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 C21orf62Q9NYP8 219 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 LINC01548A6NM66 108 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 OR2J3O76001 311 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 ECSCRQ19T08 205 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 C9orf139Q6ZV77 190 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 OR1B1Q8NGR6 318 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 MRPL27Q9P0M9 148 aaKnown RBP10.11□□□□□ -0.79
SNX1-211ENST00000560829 CENPEQ02224 2701 aa10.11□□□□□ -0.79
SNX1-211ENST00000560829 SH2D7A6NKC9 451 aaPredicted RBP10.1□□□□□ -0.79
SNX1-211ENST00000560829 GNG7O60262 68 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 IGF1P05019 195 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 AKR1C3P42330 323 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 KIAA0141Q14154 515 aaPredicted RBP10.1□□□□□ -0.79
SNX1-211ENST00000560829 TMEM241Q24JQ0 296 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
SNX1-211ENST00000560829 NAV2Q8IVL1 2488 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 TSPAN4O14817 238 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 OR2C1O95371 312 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 IGHG2P01859 326 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
SNX1-211ENST00000560829 HIST2H2BCQ6DN03 193 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 FXYD5Q96DB9 178 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 HIGD1AQ9Y241 93 aa10.1□□□□□ -0.79
SNX1-211ENST00000560829 POLQO75417 2590 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 G3V318 75 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 NDUFB4O95168 129 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 BRI3O95415 125 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 OR10J4P0C629 311 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 LY6EQ16553 131 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 ZNF491Q8N8L2 437 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
SNX1-211ENST00000560829 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
SNX1-211ENST00000560829 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 SCO2A0A1W2PP80 73 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 COLCA2A8K830 154 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 LYZP61626 148 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 RPL23P62829 140 aaKnown RBP10.08□□□□□ -0.8
SNX1-211ENST00000560829 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 Q56UQ5 140 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 CYB5R2Q6BCY4 276 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 ZNF343Q6P1L6 599 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 ZNF502Q8TBZ5 544 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 CSMD1Q96PZ7 3565 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 PYYP10082 97 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 GP9P14770 177 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 RHOGP84095 191 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 C15orf32Q32M92 178 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 Q8WTZ3 238 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 SLC25A39Q9BZJ4 359 aaPredicted RBP10.08□□□□□ -0.8
SNX1-211ENST00000560829 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 PRELID1Q9Y255 219 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 S4R3C0 116 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 APCP25054 2843 aa10.08□□□□□ -0.8
SNX1-211ENST00000560829 ZFHX3Q15911 3703 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 MDFIC2A0A1B0GVS7 189 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 CTSGP08311 255 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
SNX1-211ENST00000560829 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 SHANK2-AS3Q9BTD1 123 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 DERL1Q9BUN8 251 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 GAR1Q9NY12 217 aaKnown RBP10.07□□□□□ -0.8
SNX1-211ENST00000560829 ZNF580Q9UK33 172 aa10.07□□□□□ -0.8
SNX1-211ENST00000560829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.89e-7■■■■□ 23.5
SNX1-211ENST00000560829 H3BRN7 92 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 MYCNOSP40205 109 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 IER3P46695 156 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 ADIRFQ15847 76 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 S100A7AQ86SG5 101 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 OR5R1Q8NH85 324 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 C9JCJ5 164 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 H3BUA1 57 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 IL4P05112 153 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 PPIFP30405 207 aaKnown RBP10.06□□□□□ -0.8
SNX1-211ENST00000560829 ADMP35318 185 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 SUMO1P63165 101 aaKnown RBP10.06□□□□□ -0.8
SNX1-211ENST00000560829 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 C2CD4CQ8TF44 421 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms