RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 P2RY1P47900 373 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 KIR2DL5AQ8N109 375 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 KIR2DL5BQ8NHK3 375 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 NARS2Q96I59 477 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 PTTG2Q9NZH5 202 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 JTBO76095 146 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 TFPI2P48307 235 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 APOC4P55056 127 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 Q6ZWC4 215 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 GLMPQ8WWB7 406 aa11.21□□□□□ -0.61
SNRPA1-210ENST00000560383 UBE2CO00762 179 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 BUB3O43684 328 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 TRGV9Q99603 122 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 NUDT15Q9NV35 164 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 TBC1D24Q9ULP9 559 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 BIRC6Q9NR09 4857 aa11.2□□□□□ -0.62
SNRPA1-210ENST00000560383 TRAV6A0A075B6T7 132 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 HELTA6NFD8 242 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 ZFP92A6NM28 416 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 K7EQG2 157 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 PAX9P55771 341 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 ZNF90Q03938 601 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 ASAH1Q13510 395 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 IAH1Q2TAA2 248 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 FAM24BQ8N5W8 94 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 SMIM8Q96KF7 97 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 RABAC1Q9UI14 185 aa11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-210ENST00000560383 PMS2P5A8MQ11 134 aa11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 FABP1P07148 127 aa11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 EIF2B2P49770 351 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 AP2S1P53680 142 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 ZNF124Q15973 351 aa11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 WFDC3Q8IUB2 231 aa11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 ZBTB8BQ8NAP8 495 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 ZNF431Q8TF32 576 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 PAIP2BQ9ULR5 123 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-210ENST00000560383 FAM240BA0A1B0GVZ2 78 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 H3BP45 60 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 UPK1BO75841 260 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 H2AFB2P0C5Z0 115 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 TAS2R30P59541 319 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 DEFB131AP59861 70 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 MZT2BQ6NZ67 158 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 TMEM14EPQ6UXP3 125 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 STPG3Q8N7X2 389 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 RAB40CQ96S21 281 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 PSENENQ9NZ42 101 aa11.17□□□□□ -0.62
SNRPA1-210ENST00000560383 SSSCA1O60232 199 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 CFDP00746 253 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 ACOT7LQ6ZUV0 252 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 RNF183Q96D59 192 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 RCL1Q9Y2P8 373 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-210ENST00000560383 SPRY2O43597 315 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 TSC22D2O75157 780 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 IFITM3Q01628 133 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 C12orf45Q8N5I9 185 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
SNRPA1-210ENST00000560383 FNDC10F2Z333 226 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 IL5P05113 134 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 ATF4P18848 351 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 OR2F1Q13607 317 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
SNRPA1-210ENST00000560383 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms