RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SMIM8Q96KF7 97 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 TRGV9Q99603 122 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 RETNQ9HD89 108 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 TBC1D24Q9ULP9 559 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 LYSTQ99698 3801 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 AGRNO00468 2067 aa9.75□□□□□ -0.85
SMAD3-213ENST00000560175 IL4P05112 153 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 AP2S1P53680 142 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-213ENST00000560175 APOC4P55056 127 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 POLR2GP62487 172 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMAD3-213ENST00000560175 ZNF90Q03938 601 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 ASAH1Q13510 395 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 APRG1Q8IVJ8 170 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 NARS2Q96I59 477 aaKnown RBP9.74□□□□□ -0.85
SMAD3-213ENST00000560175 SLC35E1Q96K37 410 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
SMAD3-213ENST00000560175 PTTG2Q9NZH5 202 aa9.74□□□□□ -0.85
SMAD3-213ENST00000560175 IGKV3-7A0A075B6H7 116 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 HELTA6NFD8 242 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 DNASE2O00115 360 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-213ENST00000560175 TFPI2P48307 235 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 TAS2R30P59541 319 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 ZNF124Q15973 351 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 SPANXN5Q5MJ07 72 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 TMEM14EPQ6UXP3 125 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 FAM24BQ8N5W8 94 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 STPG3Q8N7X2 389 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 ZBTB8BQ8NAP8 495 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-213ENST00000560175 RNF183Q96D59 192 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
SMAD3-213ENST00000560175 STRAPQ9Y3F4 350 aaKnown RBP9.73□□□□□ -0.85
SMAD3-213ENST00000560175 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 TRAV6A0A075B6T7 132 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 ZFP92A6NM28 416 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 SNRPGP15A8MWD9 76 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 CFDP00746 253 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-213ENST00000560175 H2AFB2P0C5Z0 115 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 LYL1P12980 280 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 EIF2B2P49770 351 aaKnown RBP9.72□□□□□ -0.85
SMAD3-213ENST00000560175 IFITM3Q01628 133 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 IL15RAQ13261 267 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 IAH1Q2TAA2 248 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-213ENST00000560175 TMEM144Q7Z5S9 345 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-213ENST00000560175 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
SMAD3-213ENST00000560175 FAM240BA0A1B0GVZ2 78 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 SPRY2O43597 315 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 TSC22D2O75157 780 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 UPK1BO75841 260 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 IL5P05113 134 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 FABP1P07148 127 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 DEFB131AP59861 70 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 RPL11P62913 178 aaKnown RBP9.71□□□□□ -0.86
SMAD3-213ENST00000560175 ZNF846Q147U1 533 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 MZT2BQ6NZ67 158 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
SMAD3-213ENST00000560175 CSTL1Q9H114 145 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 C11orf1Q9H5F2 150 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 PSENENQ9NZ42 101 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 SLC45A2Q9UMX9 530 aa9.71□□□□□ -0.86
SMAD3-213ENST00000560175 RCL1Q9Y2P8 373 aaKnown RBP9.71□□□□□ -0.86
SMAD3-213ENST00000560175 H3BP45 60 aa9.7□□□□□ -0.86
SMAD3-213ENST00000560175 MBPP02686 304 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-213ENST00000560175 RPL35AP18077 110 aaKnown RBP9.7□□□□□ -0.86
SMAD3-213ENST00000560175 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-213ENST00000560175 NUP62P37198 522 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-213ENST00000560175 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-213ENST00000560175 STXBP6Q8NFX7 210 aa9.7□□□□□ -0.86
SMAD3-213ENST00000560175 SEC22CQ9BRL7 303 aa9.7□□□□□ -0.86
SMAD3-213ENST00000560175 PFDN2Q9UHV9 154 aa9.7□□□□□ -0.86
SMAD3-213ENST00000560175 RYR3Q15413 4870 aa9.7□□□□□ -0.86
SMAD3-213ENST00000560175 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 K7EPK0 472 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 SSSCA1O60232 199 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 DLK1P80370 383 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 SIGLEC15Q6ZMC9 328 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-213ENST00000560175 ACOT7LQ6ZUV0 252 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 TRPT1Q86TN4 253 aaKnown RBP9.69□□□□□ -0.86
SMAD3-213ENST00000560175 IL17DQ8TAD2 202 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 NRN1Q9NPD7 142 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 SACSQ9NZJ4 4579 aa9.69□□□□□ -0.86
SMAD3-213ENST00000560175 CCNKO75909 580 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-213ENST00000560175 PLP1P60201 277 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 DEFB135Q30KP9 77 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 LEMD1Q68G75 181 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 GATAD1Q8WUU5 269 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 C2orf50Q96LR7 162 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 GGACTQ9BVM4 153 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 GSKIPQ9P0R6 139 aa9.68□□□□□ -0.86
SMAD3-213ENST00000560175 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
SMAD3-213ENST00000560175 CCSO14618 274 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms