RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 C17orf77Q96MU5 243 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 SLC35B3Q9H1N7 401 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 COL24A1Q17RW2 1714 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 SPHKAPQ2M3C7 1700 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 MARF1Q9Y4F3 1742 aaKnown RBP3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 MYLKQ15746 1914 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 HCFC1P51610 2035 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 SCN2AQ99250 2005 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 DIP2CQ9Y2E4 1556 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 STRCQ7RTU9 1775 aa3.46□□□□□ -1.86
HMGB3P26-201ENST00000560051 FER1L6Q2WGJ9 1857 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ABCC6O95255 1503 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ARHGEF12Q9NZN5 1544 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 CC2D2AQ9P2K1 1620 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ALPK3Q96L96 1907 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 HEATR5AQ86XA9 2040 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGKV1D-13A0A0B4J2D9 117 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 OOSP1A8MZH6 123 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 C19orf84I3L1E1 186 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ATOX1O00244 68 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 COX7A2P2O60397 106 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 TCRAP04437 139 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF688P0C7X2 276 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF286BP0CG31 522 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGKV1-13P0DP09 117 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 EGR2P11161 476 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 CRISP2P16562 243 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 INSL3P51460 131 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 NDUFA8P51970 172 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ERVK-16P61578 105 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 GNB2P62879 340 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 HBBP68871 147 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF79Q15937 498 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 C12orf73Q69YU5 71 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 LGALS9CQ6DKI2 356 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 FOXL2NBQ6ZUU3 175 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ODF3L1Q8IXM7 274 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 LINC00471Q8N535 108 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 RPP25LQ8N5L8 163 aaKnown RBP3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 OR5H2Q8NGV7 314 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF721Q8TF20 911 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 TMEM158Q8WZ71 300 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 CNRIP1Q96F85 164 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 C18orf15Q96N68 181 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 PARP12Q9H0J9 701 aaKnown RBP3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 DNAJC15Q9Y5T4 150 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 C1orf167Q5SNV9 1468 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 WIZO95785 1651 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 SCN9AQ15858 1988 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 DOCK8Q8NF50 2099 aa3.45□□□□□ -1.86
HMGB3P26-201ENST00000560051 EDC4Q6P2E9 1401 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 DIP2BQ9P265 1576 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGHV3OR16-13A0A075B7E8 117 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGHV6-1A0A0B4J1U7 121 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGHV1-69DA0A0B4J2H0 117 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 A0A0J9YW62 118 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 A0A0J9YXV3 536 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 KLF18A0A0U1RQI7 1052 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 UMAD1C9J7I0 102 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 M0R381 172 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 LST1O00453 97 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF253O75346 499 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 PPP1R3DO95685 299 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 NGFP01138 241 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGLV3-27P01718 113 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 CD3DP04234 171 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 SRP19P09132 144 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGHV4-30-4P0DP06 118 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 COX6A1P12074 109 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 S100A4P26447 101 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 POLR2IP36954 125 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 PLA2G5P39877 138 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 PYDC2Q56P42 97 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF329Q86UD4 541 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF843Q8N446 348 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 GEMIN6Q8WXD5 167 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 CHAC1Q9BUX1 264 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 POLR2J2Q9GZM3 115 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 C16orf95Q9H693 158 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 ZNF286AQ9HBT8 521 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 COQ4Q9Y3A0 265 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 DNMT1P26358 1616 aaKnown RBP3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 CLTCL1P53675 1640 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 NFAT5O94916 1531 aa3.44□□□□□ -1.86
HMGB3P26-201ENST00000560051 ARHGEF17Q96PE2 2063 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 PPRC1Q5VV67 1664 aaKnown RBP3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 MIA3Q5JRA6 1907 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGHV3OR16-12A0A075B7B8 117 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 IGLV9-49A0A0B4J1Y8 123 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 TRAV41A0A0B4J266 112 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 PIGBOS1A0A0B4J2F0 54 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 A0A0G2JND7 137 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 A8MUN3 132 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 SYS1-DBNDD2H3BUS1 97 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 M0R378 163 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 GNGT2O14610 69 aa3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 CREBL2O60519 120 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P26-201ENST00000560051 FSTL3O95633 263 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms