RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HNRNPCP07910 306 aaKnown RBP eCLIP7.17□□□□□ -1.26
HERC1-206ENST00000559996 PSG1P11464 419 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 FGF7P21781 194 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 ARL3P36405 182 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
HERC1-206ENST00000559996 PLP1P60201 277 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 AKR1C1Q04828 323 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 KLF5Q13887 457 aaPredicted RBP7.17□□□□□ -1.26
HERC1-206ENST00000559996 MIC13Q5XKP0 118 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 SPSB3Q6PJ21 355 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 UNQ9165/PRO28630Q6UXU0 137 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 GPHB5Q86YW7 130 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 SPATA3Q8NHX4 192 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 STOML3Q8TAV4 291 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
HERC1-206ENST00000559996 SH3BGRL3Q9H299 93 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 A0A1W2PRX2 142 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 ZFP92A6NM28 416 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
HERC1-206ENST00000559996 MPDU1O75352 247 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 SPP1P10451 314 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 EDN2P20800 178 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 CAMLGP49069 296 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 TOMM20LQ6UXN7 152 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 IL34Q6ZMJ4 242 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 ADAMTSL5Q6ZMM2 481 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 BAP18Q8IXM2 172 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 BPIFCQ8NFQ6 507 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 TMEM37Q8WXS4 190 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 VSIRQ9H7M9 311 aa7.16□□□□□ -1.26
HERC1-206ENST00000559996 MRPL27Q9P0M9 148 aaKnown RBP7.16□□□□□ -1.26
HERC1-206ENST00000559996 PUS1Q9Y606 427 aaKnown RBP eCLIP7.16□□□□□ -1.26
HERC1-206ENST00000559996 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 KANTRA0A1W2PQU2 76 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 LINC01619G3V211 115 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 CCL24O00175 119 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 NDUFA4O00483 81 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 NUPL2O15504 423 aaKnown RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 IFNA5P01569 189 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 SLURP1P55000 103 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 IFITM2Q01629 132 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 ZNF616Q08AN1 781 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 ZNF266Q14584 549 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 USF2Q15853 346 aaPredicted RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 NSUN5P1Q3KNT7 163 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 GCSAMLQ5JQS6 135 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 ZNF600Q6ZNG1 722 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 SLC51BQ86UW2 128 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 ST8SIA2Q92186 375 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 PSMG3Q9BT73 122 aaPredicted RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 ZNF471Q9BX82 626 aaPredicted RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 GAR1Q9NY12 217 aaKnown RBP7.15□□□□□ -1.26
HERC1-206ENST00000559996 TIMM9Q9Y5J7 89 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 U3KQE9 123 aa7.15□□□□□ -1.26
HERC1-206ENST00000559996 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 IGHV3OR16-8A0A075B7F1 116 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 BORCS7-ASMTA0A0B4J1R7 106 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 LGALS9O00182 355 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 APOHP02749 345 aaPredicted RBP7.14□□□□□ -1.27
HERC1-206ENST00000559996 MYCNOSP40205 109 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 RIPPLY3P57055 190 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 B2MP61769 119 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 SELENOTP62341 195 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 KHDC1LQ5JSQ8 128 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 MORN5Q5VZ52 161 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 OR51G1Q8NGK1 321 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 OR2G3Q8NGZ4 309 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 SCGB1C1Q8TD33 95 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 SLC25A32Q9H2D1 315 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 SLC39A9Q9NUM3 307 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 PXMP4Q9Y6I8 212 aa7.14□□□□□ -1.27
HERC1-206ENST00000559996 NUDT19A8MXV4 375 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 SEC11BP0C7V7 166 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 C8orf88P0DMB2 117 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 CRYBB3P26998 211 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 SERF2P84101 59 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 RELQ04864 619 aaPredicted RBP7.13□□□□□ -1.27
HERC1-206ENST00000559996 KRTAP21-3Q3LHN1 58 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 TM4SF20Q53R12 229 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 C12orf54Q6X4T0 127 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 REC114Q7Z4M0 266 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 RPP25LQ8N5L8 163 aaKnown RBP7.13□□□□□ -1.27
HERC1-206ENST00000559996 Q8WTZ3 238 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 TMEM190Q8WZ59 177 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 RNF125Q96EQ8 232 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 C17orf77Q96MU5 243 aa7.13□□□□□ -1.27
HERC1-206ENST00000559996 TMEM213A2RRL7 107 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 A8MWP6 167 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 K7EMT4 169 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms