RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RAB40CQ96S21 281 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 HRH4Q9H3N8 390 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 CCDC160A6NGH7 325 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 SNRPGP15A8MWD9 76 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 LYZL2Q7Z4W2 148 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 TMED4Q7Z7H5 227 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 TOMM5Q8N4H5 51 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 RBKSQ9H477 322 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 U3KQE9 123 aa9.18□□□□□ -0.94
SNX1-209ENST00000559961 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 IGHV4-28A0A0C4DH34 117 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 PSG1P11464 419 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 VAMP1P23763 118 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 TNFSF8P32971 234 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 INPP1P49441 399 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 OR8G2PQ6IF36 304 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 COQ8AQ8NI60 647 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 RNF125Q96EQ8 232 aa9.17□□□□□ -0.94
SNX1-209ENST00000559961 CIB3Q96Q77 187 aaPredicted RBP9.17□□□□□ -0.94
SNX1-209ENST00000559961 LYSTQ99698 3801 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 BUB3O43684 328 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 CFDP00746 253 aaPredicted RBP9.16□□□□□ -0.94
SNX1-209ENST00000559961 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 USF2Q15853 346 aaPredicted RBP9.16□□□□□ -0.94
SNX1-209ENST00000559961 LINC00052Q96N35 136 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
SNX1-209ENST00000559961 NKX2-1P43699 371 aaPredicted RBP9.15□□□□□ -0.94
SNX1-209ENST00000559961 LYZP61626 148 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 C1orf194Q5T5A4 169 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 GGNBP1Q5YKI7 109 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 EBLN2Q6P2I7 272 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 OR8I2Q8N0Y5 310 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 Q8NAQ8 132 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 DEDD2Q8WXF8 326 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.94
SNX1-209ENST00000559961 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 TMED3Q9Y3Q3 217 aa9.15□□□□□ -0.94
SNX1-209ENST00000559961 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
SNX1-209ENST00000559961 ZNF705EA8MWA4 302 aaPredicted RBP9.14□□□□□ -0.95
SNX1-209ENST00000559961 H3BMQ9 156 aa9.14□□□□□ -0.95
SNX1-209ENST00000559961 SUPT4H1P63272 117 aaKnown RBP9.14□□□□□ -0.95
SNX1-209ENST00000559961 GAMTQ14353 236 aa9.14□□□□□ -0.95
SNX1-209ENST00000559961 SPATA31B1PQ5VZV4 182 aa9.14□□□□□ -0.95
SNX1-209ENST00000559961 S100A7AQ86SG5 101 aa9.14□□□□□ -0.95
SNX1-209ENST00000559961 RPP25LQ8N5L8 163 aaKnown RBP9.14□□□□□ -0.95
SNX1-209ENST00000559961 H3BMM0 161 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 WRBO00258 174 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 DEDDO75618 318 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 IAPPP10997 89 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 SLC25A6P12236 298 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 C4BPBP20851 252 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 GALR1P47211 349 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 PSMB3P49720 205 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 MEOX2P50222 304 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 TMEM170AQ8WVE7 144 aa9.13□□□□□ -0.95
SNX1-209ENST00000559961 C7orf50Q9BRJ6 194 aaKnown RBP9.13□□□□□ -0.95
SNX1-209ENST00000559961 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
SNX1-209ENST00000559961 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 TEX48A0A1B0GUV7 120 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 SMIM9A6NGZ8 99 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 IFNA21P01568 189 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 IGKV3-20P01619 116 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
SNX1-209ENST00000559961 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 ZNF90Q03938 601 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 OR2F1Q13607 317 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 RBMY1FQ15415 496 aaKnown RBP9.12□□□□□ -0.95
SNX1-209ENST00000559961 SPANXN2Q5MJ10 180 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 BPIFCQ8NFQ6 507 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 TRGV9Q99603 122 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 GOLT1BQ9Y3E0 138 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
SNX1-209ENST00000559961 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 DEFB131BA0A096LNP1 70 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 SYNGR2O43760 224 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 SFT2D2O95562 160 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
SNX1-209ENST00000559961 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 AKR1C1Q04828 323 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 Q6ZTC4 211 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 GPR82Q96P67 336 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 SOSTQ9BQB4 213 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 NDUFAF3Q9BU61 184 aa9.11□□□□□ -0.95
SNX1-209ENST00000559961 RNF126Q9BV68 326 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms