RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 OR4F5Q8NH21 305 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 SETD2Q9BYW2 2564 aaPredicted RBP9.43□□□□□ -0.9
HERC1-205ENST00000559886 TGOLN2O43493 480 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 IGHV3-11P01762 117 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 PLP1P60201 277 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 OR4X2Q8NGF9 303 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 BLOC1S1P78537 153 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 FAM209BQ5JX69 171 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 OR51G1Q8NGK1 321 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 RCC1LQ96I51 464 aaKnown RBP9.42□□□□□ -0.9
HERC1-205ENST00000559886 UBE2E2Q96LR5 201 aa9.42□□□□□ -0.9
HERC1-205ENST00000559886 ZNF726P1Q15940 193 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 PXDC1Q5TGL8 231 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 Q8WTZ3 238 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 TMEM37Q8WXS4 190 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 ZNF414Q96IQ9 312 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 C19orf24Q9BVV8 132 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 DNAJC4Q9NNZ3 241 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 JMJD1CQ15652 2540 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 SEC14L6B5MCN3 397 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 PPP5D1E7EU14 171 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 OR2C1O95371 312 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 ZNF600Q6ZNG1 722 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 GATAD1Q8WUU5 269 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
HERC1-205ENST00000559886 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
HERC1-205ENST00000559886 WI2-2373I1.2A0A1W2PRP0 233 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 ARL3P36405 182 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 PATE2Q6UY27 113 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 SSX7Q7RTT5 188 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 LYPD6BQ8NI32 183 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 PFDN5Q99471 154 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 GNB4Q9HAV0 340 aa9.4□□□□□ -0.9
HERC1-205ENST00000559886 SEPSECSQ9HD40 501 aaKnown RBP9.4□□□□□ -0.9
HERC1-205ENST00000559886 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.91
HERC1-205ENST00000559886 COX7A2P2O60397 106 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 OR5G3P0C626 314 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 ORM2P19652 201 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.91
HERC1-205ENST00000559886 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.91
HERC1-205ENST00000559886 PROK1P58294 105 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.91
HERC1-205ENST00000559886 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 RAB24Q969Q5 203 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 RNF125Q96EQ8 232 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 SLC25A22Q9H936 323 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 DOK5Q9P104 306 aa9.4□□□□□ -0.91
HERC1-205ENST00000559886 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.91
HERC1-205ENST00000559886 PUS1Q9Y606 427 aaKnown RBP eCLIP9.4□□□□□ -0.91
HERC1-205ENST00000559886 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 A0A1W2PPV4 95 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 HYPMO75409 117 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 IL4P05112 153 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 LGALS1P09382 135 aaKnown RBP9.39□□□□□ -0.91
HERC1-205ENST00000559886 LYZP61626 148 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 RHOBP62745 196 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 C10orf113Q5VZT2 155 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 IGHV3-35A0A0C4DH35 117 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 BMPR1BO00238 502 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 FAM78BQ5VT40 261 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 RNF2Q99496 336 aa9.39□□□□□ -0.91
HERC1-205ENST00000559886 MRPL27Q9P0M9 148 aaKnown RBP9.39□□□□□ -0.91
HERC1-205ENST00000559886 TRAV1-1A0A0B4J248 108 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 HAX1O00165 279 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 TOMM20LQ6UXN7 152 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 MRPL32Q9BYC8 188 aaKnown RBP9.38□□□□□ -0.91
HERC1-205ENST00000559886 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 FUT9Q9Y231 359 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 A0A1B0GUS0 222 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 I3L521 148 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
HERC1-205ENST00000559886 EIF3GO75821 320 aaKnown RBP eCLIP9.38□□□□□ -0.91
HERC1-205ENST00000559886 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
HERC1-205ENST00000559886 SPATA31B1PQ5VZV4 182 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 LCN15Q6UWW0 184 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 HIGD1AQ9Y241 93 aa9.38□□□□□ -0.91
HERC1-205ENST00000559886 MAP1LC3B2A6NCE7 125 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
HERC1-205ENST00000559886 CD28P10747 220 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 MIR17HGQ75NE6 70 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 MAP1LC3BQ9GZQ8 125 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 NDUFA4O00483 81 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms