RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 OR1S1Q8NH92 325 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 TMEM170AQ8WVE7 144 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 SLC35E1Q96K37 410 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 RAB40CQ96S21 281 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 RBKSQ9H477 322 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 TBC1D24Q9ULP9 559 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 BIRC6Q9NR09 4857 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 HYDINQ4G0P3 5121 aa8.92□□□□□ -0.98
SPG11-219ENST00000559822 ZFP92A6NM28 416 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 FAM90A26D6RGX4 464 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 PSG1P11464 419 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 TNFSF8P32971 234 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 GPX4P36969 197 aaPredicted RBP8.91□□□□□ -0.98
SPG11-219ENST00000559822 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
SPG11-219ENST00000559822 OR8G2PQ6IF36 304 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 LYZL2Q7Z4W2 148 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 MCFD2Q8NI22 146 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 RNF125Q96EQ8 232 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 SLIRPQ9GZT3 109 aaKnown RBP8.91□□□□□ -0.98
SPG11-219ENST00000559822 PRR13Q9NZ81 148 aa8.91□□□□□ -0.98
SPG11-219ENST00000559822 TRAV10A0A0B4J240 114 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 IGLL5B9A064 214 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 H3BMQ9 156 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 RAB11AP62491 216 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 TMEM128Q5BJH2 165 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
SPG11-219ENST00000559822 DEDD2Q8WXF8 326 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 SOSTQ9BQB4 213 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 PBDC1Q9BVG4 233 aa8.9□□□□□ -0.98
SPG11-219ENST00000559822 AGRNO00468 2067 aa8.9□□□□□ -0.99
SPG11-219ENST00000559822 MED6O75586 246 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 DEDDO75618 318 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
SPG11-219ENST00000559822 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 ID1P41134 155 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 NKX2-1P43699 371 aaPredicted RBP8.89□□□□□ -0.99
SPG11-219ENST00000559822 RBMY1FQ15415 496 aaKnown RBP8.89□□□□□ -0.99
SPG11-219ENST00000559822 C1orf194Q5T5A4 169 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 SAMD13Q5VXD3 122 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 TMED4Q7Z7H5 227 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 TOMM5Q8N4H5 51 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 CSNK1G2-AS1Q8NCQ2 148 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 CIB3Q96Q77 187 aaPredicted RBP8.89□□□□□ -0.99
SPG11-219ENST00000559822 CLEC5AQ9NY25 188 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 X6R8D5 127 aa8.89□□□□□ -0.99
SPG11-219ENST00000559822 SNRPGP15A8MWD9 76 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 H3BMM0 161 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 CFDP00746 253 aaPredicted RBP8.88□□□□□ -0.99
SPG11-219ENST00000559822 SLC25A6P12236 298 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 S100A5P33763 92 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 LYZP61626 148 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 RPP30P78346 268 aaKnown RBP8.88□□□□□ -0.99
SPG11-219ENST00000559822 GAMTQ14353 236 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 PYDC2Q56P42 97 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 SLC25A21Q9BQT8 299 aaPredicted RBP8.88□□□□□ -0.99
SPG11-219ENST00000559822 TMED3Q9Y3Q3 217 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
SPG11-219ENST00000559822 VAMP1P23763 118 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 S100A7P31151 101 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 PSMB3P49720 205 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 SPATA31B1PQ5VZV4 182 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 Q6ZTC4 211 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 LRTM2Q8N967 370 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 COQ8AQ8NI60 647 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 TRIM63Q969Q1 353 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 TRGV9Q99603 122 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 RNF126Q9BV68 326 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
SPG11-219ENST00000559822 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
SPG11-219ENST00000559822 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
SPG11-219ENST00000559822 TMEM189A5PLL7 270 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 PITX3O75364 302 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 IAPPP10997 89 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 ZNF90Q03938 601 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 GGNBP1Q5YKI7 109 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 FOXI2Q6ZQN5 318 aa8.86□□□□□ -0.99
SPG11-219ENST00000559822 IGHV4-4A0A075B6R2 117 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 SMIM9A6NGZ8 99 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 MEOX2P50222 304 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 LINC00052Q96N35 136 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 NEU1Q99519 415 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
SPG11-219ENST00000559822 SLC45A2Q9UMX9 530 aa8.85□□□□□ -0.99
SPG11-219ENST00000559822 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 CCDC160A6NGH7 325 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 ISLRO14498 428 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 SYNGR2O43760 224 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 SFT2D2O95562 160 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 AMBPP02760 352 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 GALR1P47211 349 aa8.84□□□□□ -0.99
SPG11-219ENST00000559822 UBE2MP61081 183 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms