RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NEU1Q99519 415 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 SLIRPQ9GZT3 109 aaKnown RBP9.39□□□□□ -0.91
TPM1-220ENST00000559556 EXTL2Q9UBQ6 330 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 HLA-DRB4X5D2U9 266 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 RTL8CO15255 209 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 NXPH3O95157 252 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 RAB3DO95716 219 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 TOMM40O96008 361 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 NKX2-1P43699 371 aaPredicted RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 STEAP1BQ6NZ63 245 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 SELENOHQ8IZQ5 122 aaKnown RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
TPM1-220ENST00000559556 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
TPM1-220ENST00000559556 ABCA13Q86UQ4 5058 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 GABARAPH6UMI1 98 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 NPY1RP25929 384 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 SURF2Q15527 256 aaPredicted RBP9.37□□□□□ -0.91
TPM1-220ENST00000559556 NMSQ5H8A3 153 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 GPR146Q96CH1 333 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 RTBDNQ9BSG5 229 aaPredicted RBP9.37□□□□□ -0.91
TPM1-220ENST00000559556 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
TPM1-220ENST00000559556 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
TPM1-220ENST00000559556 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 PRSS29PA6NIE9 313 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 RGS5O15539 181 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 PSG1P11464 419 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 NUP62P37198 522 aaPredicted RBP9.36□□□□□ -0.91
TPM1-220ENST00000559556 MEF2DQ14814 521 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 TMEM268Q5VZI3 342 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 NOXA1Q86UR1 476 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 ACY3Q96HD9 319 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 TMEM56-RWDD3S4R434 201 aa9.36□□□□□ -0.91
TPM1-220ENST00000559556 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 SPART-AS1P0CW21 52 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 MRPS10P82664 201 aaKnown RBP9.35□□□□□ -0.91
TPM1-220ENST00000559556 OR51G1Q8NGK1 321 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 S100ZQ8WXG8 99 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 MIXL1Q9H2W2 232 aa9.35□□□□□ -0.91
TPM1-220ENST00000559556 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
TPM1-220ENST00000559556 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 M0R2N4 97 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 SULT1A3P0DMM9 295 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 SULT1A4P0DMN0 295 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 SPANXN2Q5MJ10 180 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 OR8G2PQ6IF36 304 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 OR4C16Q8NGL9 310 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 SMIM4Q8WVI0 70 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 IL22RA2Q969J5 263 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 WDR12Q9GZL7 423 aaKnown RBP9.34□□□□□ -0.91
TPM1-220ENST00000559556 HSPB7Q9UBY9 170 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 GPR132Q9UNW8 380 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
TPM1-220ENST00000559556 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 DISC1C4P0D8 188 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 SOCS3O14543 225 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 CTDSP2O14595 271 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 AKAIN1P0CW23 69 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 PSMB3P49720 205 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 DEFB1P60022 68 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 ZNF79Q15937 498 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 Q6ZR54 194 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 DKK2Q9UBU2 259 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 U3KQ87 197 aa9.33□□□□□ -0.92
TPM1-220ENST00000559556 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 IFNA10P01566 189 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 PAX9P55771 341 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
TPM1-220ENST00000559556 OXA1LQ15070 435 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 SPATA31B1PQ5VZV4 182 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 LGI3Q8N145 548 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 DTD1Q8TEA8 209 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 DIRAS2Q96HU8 199 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 PRRT1Q99946 306 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 NIPSNAP3BQ9BS92 247 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms