RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 UBE2CO00762 179 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 SPRY2O43597 315 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 SSSCA1O60232 199 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 NKX2-1P43699 371 aaPredicted RBP6.06□□□□□ -1.44
SNX1-207ENST00000559401 POLR2GP62487 172 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNX1-207ENST00000559401 AKR1C1Q04828 323 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 GAMTQ14353 236 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 IAH1Q2TAA2 248 aaPredicted RBP6.06□□□□□ -1.44
SNX1-207ENST00000559401 CNPY1Q3B7I2 92 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 Q6ZWC4 215 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 KIR2DL5AQ8N109 375 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 FAM24BQ8N5W8 94 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 KIR2DL5BQ8NHK3 375 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 OVOL2Q9BRP0 275 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 NUDT15Q9NV35 164 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 PSENENQ9NZ42 101 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 GSKIPQ9P0R6 139 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 STRAPQ9Y3F4 350 aaKnown RBP6.06□□□□□ -1.44
SNX1-207ENST00000559401 NBEAL2Q6ZNJ1 2754 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 FAM25EA8MYX2 175 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 K7EQG2 157 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 CCSO14618 274 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 PLA2G10O15496 165 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 TCRBP04435 133 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 NUP62P37198 522 aaPredicted RBP6.05□□□□□ -1.44
SNX1-207ENST00000559401 AP2S1P53680 142 aaPredicted RBP6.05□□□□□ -1.44
SNX1-207ENST00000559401 ZNF90Q03938 601 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 ZNF846Q147U1 533 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 PSMG4Q5JS54 123 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 C16orf54Q6UWD8 224 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 ACOT7LQ6ZUV0 252 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 STHQ8IWL8 128 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 GLMPQ8WWB7 406 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 S100ZQ8WXG8 99 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 CCDC32Q9BV29 185 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 CSTL1Q9H114 145 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 TP53TG1Q9Y2A0 90 aa6.05□□□□□ -1.44
SNX1-207ENST00000559401 IGKV1D-37A0A075B6S9 117 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 A0A0J9YWU9 116 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 FAM240BA0A1B0GVZ2 78 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 KNCNA6PVL3 124 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 SNRPGP15A8MWD9 76 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 CA1P00915 261 aaPredicted RBP6.04□□□□□ -1.44
SNX1-207ENST00000559401 ID3Q02535 119 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 PMS2P11Q13670 270 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 MZT2BQ6NZ67 158 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 SIGLEC15Q6ZMC9 328 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 ZBTB8BQ8NAP8 495 aaPredicted RBP6.04□□□□□ -1.44
SNX1-207ENST00000559401 OR4D5Q8NGN0 318 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 MITD1Q8WV92 249 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 RNF183Q96D59 192 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 TRGV9Q99603 122 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 SEC22CQ9BRL7 303 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 NRN1Q9NPD7 142 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 U3KQE9 123 aa6.04□□□□□ -1.44
SNX1-207ENST00000559401 C5orf51A6NDU8 294 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 CXorf65A6NEN9 183 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 L7N2F9 121 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 BUB3O43684 328 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 METTL15P1P0C7V9 234 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 RRAS2P62070 204 aaPredicted RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 VAMP2P63027 116 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 ACTL10Q5JWF8 245 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 OR8I2Q8N0Y5 310 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 BPIFCQ8NFQ6 507 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 ENKURQ8TC29 256 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 ZNF431Q8TF32 576 aaPredicted RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 DCANP1Q8TF63 244 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 RARRES2Q99969 163 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 WDR12Q9GZL7 423 aaKnown RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 SLC25A22Q9H936 323 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 FBXL17Q9UF56 701 aa6.03□□□□□ -1.44
SNX1-207ENST00000559401 RCL1Q9Y2P8 373 aaKnown RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 LSM5Q9Y4Y9 91 aaKnown RBP6.03□□□□□ -1.44
SNX1-207ENST00000559401 HUWE1Q7Z6Z7 4374 aaKnown RBP6.02□□□□□ -1.45
SNX1-207ENST00000559401 IGKV1OR2-108A0A075B7D4 117 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 A6NHS1 94 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 PRSS46E5RG02 174 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 CCNKO75909 580 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 CFDP00746 253 aaPredicted RBP6.02□□□□□ -1.45
SNX1-207ENST00000559401 IL5P05113 134 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 ORM2P19652 201 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 GATA2P23769 480 aaPredicted RBP6.02□□□□□ -1.45
SNX1-207ENST00000559401 BCAP31P51572 246 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 S100A10P60903 97 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 LINC00299Q6ZSB3 139 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 C12orf45Q8N5I9 185 aaPredicted RBP6.02□□□□□ -1.45
SNX1-207ENST00000559401 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 OR10P1Q8NGE3 313 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 OR1B1Q8NGR6 318 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 OR11H2Q8NH07 326 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 SMIM8Q96KF7 97 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 RAB40CQ96S21 281 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 TMEM147Q9BVK8 224 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms