RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 DEFB1P60022 68 aa11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 CCDC71LQ8N9Z2 235 aa11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 OR52E5Q8NH55 327 aa11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 TOMM40O96008 361 aa11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 ELK1P19419 428 aa11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 ARRDC1Q8N5I2 433 aa11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 AP3S1Q92572 193 aa11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 SAV1Q9H4B6 383 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-205ENST00000559245 NXPH3O95157 252 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 CD3DP04234 171 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 OXA1LQ15070 435 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 TMEM88Q6PEY1 159 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 ZNF709Q8N972 641 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 SLC24A4Q8NFF2 622 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 NPIPB3Q92617 1050 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 ACY3Q96HD9 319 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 LINC00052Q96N35 136 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 KLK11Q9UBX7 282 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.57
CDC42BPB-205ENST00000559245 HPGDSO60760 199 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 B3GALNT1O75752 331 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 PSG1P11464 419 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 FOXI2Q6ZQN5 318 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR51G1Q8NGK1 321 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR13C8Q8NGS7 320 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 WDR12Q9GZL7 423 aaKnown RBP11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
CDC42BPB-205ENST00000559245 LOC102723971A0A1B0GUV8 181 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 CEBPZOSA8MTT3 80 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 CDK2AP2O75956 126 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 CDS2O95674 445 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 HBE1P02100 147 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 ID1P41134 155 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 TNP2Q05952 138 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 LHFPL5Q8TAF8 219 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 TMEM222Q9H0R3 208 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 SLC35B3Q9H1N7 401 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 CACNG5Q9UF02 275 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 GOLT1BQ9Y3E0 138 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR5AC1P0C628 307 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 TBPP20226 339 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 NUP62P37198 522 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 PSMB3P49720 205 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 DAD1P61803 113 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 SCGB2B2Q4G0G5 96 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 C1orf158Q8N1D5 194 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 MAPKAPK5-AS1Q8N8E1 139 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR4D10Q8NGI6 311 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR52I2Q8NH67 350 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 MCFD2Q8NI22 146 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 COQ8AQ8NI60 647 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 GLYATL2Q8WU03 294 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 C7orf50Q9BRJ6 194 aaKnown RBP11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 PBDC1Q9BVG4 233 aa11.49□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 PSG9Q00887 426 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 ZNF79Q15937 498 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 RRN3P1Q2M238 152 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 SPATA31B1PQ5VZV4 182 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 NOXA1Q86UR1 476 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 SELENOHQ8IZQ5 122 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 GPR146Q96CH1 333 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 MTFP1Q9UDX5 166 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
CDC42BPB-205ENST00000559245 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM25AB3EWG3 89 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM25CB3EWG5 89 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM25GB3EWG6 89 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 SOCS3O14543 225 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 MEF2DQ14814 521 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 GSG1LQ6UXU4 331 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 CCDC190Q86UF4 302 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 ABHD1Q96SE0 405 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 SOSTQ9BQB4 213 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 ATG101Q9BSB4 218 aa11.47□□□□□ -0.57
CDC42BPB-205ENST00000559245 F6UB75 175 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms