RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 RPH3ALQ9UNE2 315 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 ROS1P08922 2347 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 A0A1B0GXF2 115 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 APELAP0DMC3 54 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 CNTFRP26992 372 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 LGALS7P47929 136 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 ETFRF1Q6IPR1 90 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 ASCL5Q7RTU5 278 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.28
SPG11-215ENST00000559193 ALKBH7Q9BT30 221 aaPredicted RBP13.27□□□□□ -0.28
SPG11-215ENST00000559193 SH3BGRL2Q9UJC5 107 aa13.27□□□□□ -0.28
SPG11-215ENST00000559193 IGHV3-21A0A0B4J1V1 117 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 PRRG2O14669 202 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 GP9P14770 177 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.29
SPG11-215ENST00000559193 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 MLST8Q9BVC4 326 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 KLK10O43240 276 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 NBEAP1P0C6P0 100 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 IGLC2P0DOY2 106 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 IGLC3P0DOY3 106 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 RPL27AP46776 148 aaKnown RBP13.27□□□□□ -0.29
SPG11-215ENST00000559193 CAMPP49913 170 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 CLEC7AQ9BXN2 247 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 TMEM133Q9H2Q1 129 aa13.27□□□□□ -0.29
SPG11-215ENST00000559193 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 CEP250Q9BV73 2442 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 DLEU1O43261 78 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 HYPMO75409 117 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 DLX1P56177 255 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 TMEM116Q8NCL8 245 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 GPR82Q96P67 336 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 JKAMPQ9P055 326 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 H3BTX0 84 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 HSBP1O75506 76 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 CRYGBP07316 175 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 FAM87AP0C7U9 286 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 BTF3P20290 206 aaKnown RBP13.26□□□□□ -0.29
SPG11-215ENST00000559193 UQCR10Q9UDW1 63 aa13.26□□□□□ -0.29
SPG11-215ENST00000559193 CA7P43166 264 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 ATOH7Q8N100 152 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
SPG11-215ENST00000559193 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
SPG11-215ENST00000559193 C5orf17Q8NAS9 161 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 C22orf15Q8WYQ4 148 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 GSX1Q9H4S2 264 aaPredicted RBP13.25□□□□□ -0.29
SPG11-215ENST00000559193 DYNLRB1Q9NP97 96 aa13.25□□□□□ -0.29
SPG11-215ENST00000559193 FAM181BA6NEQ2 426 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 TOMM40O96008 361 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 LTAP01374 205 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 MMDQ15546 238 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 MAJINQ3KP22 176 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 EBLN2Q6P2I7 272 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 RNASEKQ6P5S7 137 aaKnown RBP13.24□□□□□ -0.29
SPG11-215ENST00000559193 PRSS22Q9GZN4 317 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 SHISA9B4DS77 424 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 M0R2Z0 102 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 GTSF1Q8WW33 167 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 URB1-AS1Q96HZ7 61 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 Q9H3A6 140 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
SPG11-215ENST00000559193 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 E7EQL1 145 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 TCRAP04437 139 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 NPSP0C0P6 89 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 TFPI2P48307 235 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 PLP1P60201 277 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 FMC1Q96HJ9 113 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 IGHV2-26A0A0B4J1V2 119 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 HBBP68871 147 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 GAGE1Q13065 139 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 CYB5R2Q6BCY4 276 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 Q6ZN92 141 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 OR8B3Q8NGG8 313 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 OR8B2Q96RD0 313 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 TXN2Q99757 166 aa13.23□□□□□ -0.29
SPG11-215ENST00000559193 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 AKAP13Q12802 2813 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 TEX22C9J3V5 150 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 IGLV1-47P01700 117 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 PAX2Q02962 417 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 COL5A1-AS1Q5SY13 56 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 C8orf46Q8TAG6 207 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 ZNF492Q9P255 531 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
SPG11-215ENST00000559193 IGHV1-69-2A0A0G2JMI3 117 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 CT83Q5H943 113 aa13.22□□□□□ -0.29
SPG11-215ENST00000559193 GOLT1BQ9Y3E0 138 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms