RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 YTHDF2Q9Y5A9 579 aaKnown RBP12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 A6NDX4 124 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 MT-CO2P00403 227 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 MOSP00540 346 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 GALR1P47211 349 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 LGALS7P47929 136 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 HES1Q14469 280 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 MLANAQ16655 118 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 C19orf24Q9BVV8 132 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 ARL2-SNX15V9GYD0 113 aa12.52□□□□□ -0.4
CDC42BPB-204ENST00000559043 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 WT1-ASQ06250 92 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 VMA21Q3ZAQ7 101 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 RNASEH2CQ8TDP1 164 aaKnown RBP12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR5B12Q96R08 314 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 FUT9Q9Y231 359 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 PLXNB1O43157 2135 aa12.52□□□□□ -0.41
CDC42BPB-204ENST00000559043 S100PP25815 95 aa12.51□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR10J1P30954 320 aa12.51□□□□□ -0.41
CDC42BPB-204ENST00000559043 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
CDC42BPB-204ENST00000559043 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
CDC42BPB-204ENST00000559043 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
CDC42BPB-204ENST00000559043 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR5G3P0C626 314 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 AREGP15514 252 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 TMEM11P17152 192 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 NDUFA6P56556 154 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 FRZBQ92765 325 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 C11orf52Q96A22 123 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 SCO2A0A1W2PP80 73 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 SLC25A17O43808 307 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 AMY1AP04745 511 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 TRGC1P0CF51 173 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 C10orf55Q5SWW7 151 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 TEX45Q8NA69 505 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 TPSG1Q9NRR2 321 aa12.5□□□□□ -0.41
CDC42BPB-204ENST00000559043 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 GGCTO75223 188 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 S100A9P06702 114 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 SUB1P53999 127 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 PSG5Q15238 335 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 NECAP1Q8NC96 275 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 RBM14Q96PK6 669 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 TMEM167BQ9NRX6 74 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 PSMB11A5LHX3 300 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 IFITM10A6NMD0 228 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 ACTL6BO94805 426 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 CRYGBP07316 175 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 PVRIGQ6DKI7 326 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 NPBQ8NG41 125 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
CDC42BPB-204ENST00000559043 FCN1O00602 326 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 PPP1R2P9O14990 202 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 HILS1P60008 231 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 MMDQ15546 238 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 Q6ZS46 218 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 Q8N9W7 124 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR5R1Q8NH85 324 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 SLC25A33Q9BSK2 321 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 FNDC4Q9H6D8 234 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPB-204ENST00000559043 PCP4L1A6NKN8 68 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 NCBP2LA6PVI3 153 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 NDUFA3O95167 84 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 ZNF418Q8TF45 676 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 RNF5Q99942 180 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 MRPL32Q9BYC8 188 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 NBR2O15453 112 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 TYMSP04818 313 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 TAS2R45P59539 299 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 BLCAPP62952 87 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 PRSS8Q16651 343 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 MMD2Q8IY49 270 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 THAP8Q8NA92 274 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
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