RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
CLPX-203ENST00000558958 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
CLPX-203ENST00000558958 PHYHIPLQ96FC7 376 aa13.92□□□□□ -0.18
CLPX-203ENST00000558958 SLC39A9Q9NUM3 307 aa13.92□□□□□ -0.18
CLPX-203ENST00000558958 GGCTO75223 188 aaKnown RBP13.91□□□□□ -0.18
CLPX-203ENST00000558958 RELQ04864 619 aaPredicted RBP13.91□□□□□ -0.18
CLPX-203ENST00000558958 EIF5AL1Q6IS14 154 aaKnown RBP13.91□□□□□ -0.18
CLPX-203ENST00000558958 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
CLPX-203ENST00000558958 ZNF600Q6ZNG1 722 aa13.91□□□□□ -0.18
CLPX-203ENST00000558958 Q8WTZ3 238 aa13.91□□□□□ -0.18
CLPX-203ENST00000558958 TENM1Q9UKZ4 2725 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 IGHV3-35A0A0C4DH35 117 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 NUDT19A8MXV4 375 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 YIF1AO95070 293 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 OR2C1O95371 312 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 TSPAN15O95858 294 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 HSPB1P04792 205 aaKnown RBP13.9□□□□□ -0.18
CLPX-203ENST00000558958 FFAR4Q5NUL3 377 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 OR51G1Q8NGK1 321 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 PLA2G2EQ9NZK7 142 aa13.9□□□□□ -0.18
CLPX-203ENST00000558958 PUS1Q9Y606 427 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLPX-203ENST00000558958 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 A0A087WW49 117 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 ADARB2-AS1A8MUL3 147 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 ELLP55199 621 aaPredicted RBP13.89□□□□□ -0.19
CLPX-203ENST00000558958 ALKAL2Q6UX46 152 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 TMEM158Q8WZ71 300 aa13.89□□□□□ -0.19
CLPX-203ENST00000558958 WI2-2373I1.2A0A1W2PRP0 233 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 PLP1P60201 277 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 IFITM2Q01629 132 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 DEFB136Q30KP8 78 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 TOMM20LQ6UXN7 152 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 Q6ZRG5 221 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 NDUFA11Q86Y39 141 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 ZNF680Q8NEM1 530 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 CITED1Q99966 193 aa13.88□□□□□ -0.19
CLPX-203ENST00000558958 NDUFA4O00483 81 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 IL4P05112 153 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 GCSAMLQ5JQS6 135 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 OR11H1Q8NG94 326 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 OR1N2Q8NGR9 330 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 RNF125Q96EQ8 232 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 ZFAND3Q9H8U3 227 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 UMAD1C9J7I0 102 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 LINC01619G3V211 115 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 MBP02144 154 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 M6PRP20645 277 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 LYZP61626 148 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 ACOT6Q3I5F7 207 aaPredicted RBP13.87□□□□□ -0.19
CLPX-203ENST00000558958 AKR1C8PQ5T2L2 129 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 PXDC1Q5TGL8 231 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 RCC1LQ96I51 464 aaKnown RBP13.87□□□□□ -0.19
CLPX-203ENST00000558958 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
CLPX-203ENST00000558958 IFNA7P01567 189 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 ORM2P19652 201 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 ZP3P21754 424 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
CLPX-203ENST00000558958 RAB2AP61019 212 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 NSUN5P1Q3KNT7 163 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 FAM74A1Q5RGS3 127 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 PATE2Q6UY27 113 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 OR1B1Q8NGR6 318 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 TMEM37Q8WXS4 190 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 DOK5Q9P104 306 aa13.86□□□□□ -0.19
CLPX-203ENST00000558958 IGHV3OR16-8A0A075B7F1 116 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 ELOA3CA0A087WX78 387 aaPredicted RBP13.85□□□□□ -0.19
CLPX-203ENST00000558958 HYPMO75409 117 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 SULT1A2P50226 295 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 USF2Q15853 346 aaPredicted RBP13.85□□□□□ -0.19
CLPX-203ENST00000558958 FAM106AQ4KMX7 169 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 UNQ9165/PRO28630Q6UXU0 137 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 GATAD1Q8WUU5 269 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 DPF1Q92782 380 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
CLPX-203ENST00000558958 MRPL27Q9P0M9 148 aaKnown RBP13.85□□□□□ -0.19
CLPX-203ENST00000558958 CCL24O00175 119 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 COX7A2P2O60397 106 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 OR5G3P0C626 314 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 RAB5CP51148 216 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 FHL3Q13643 280 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 RPP25LQ8N5L8 163 aaKnown RBP13.84□□□□□ -0.19
CLPX-203ENST00000558958 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 OR1L4Q8NGR5 311 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 TMEM190Q8WZ59 177 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 PFDN5Q99471 154 aa13.84□□□□□ -0.19
CLPX-203ENST00000558958 FHITP49789 147 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 SLURP1P55000 103 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 KLF5Q13887 457 aaPredicted RBP13.83□□□□□ -0.2
CLPX-203ENST00000558958 C10orf113Q5VZT2 155 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms