RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ZNF355PQ9NSJ1 428 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 HSPB11Q9Y547 144 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 FNDC10F2Z333 226 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 L7N2F9 121 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 CORTO00230 105 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 TGOLN2O43493 480 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 PRB2P02812 416 aaPredicted RBP5.51□□□□□ -1.53
TRAF3-206ENST00000558880 IFNA4P05014 189 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 OR8U8P0C7N1 319 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 GATA2P23769 480 aaPredicted RBP5.51□□□□□ -1.53
TRAF3-206ENST00000558880 GPR183P32249 361 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 OPRK1P41145 380 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 VAMP2P63027 116 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 ZNF90Q03938 601 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 KLF5Q13887 457 aaPredicted RBP5.51□□□□□ -1.53
TRAF3-206ENST00000558880 TIGITQ495A1 244 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 AKAP14Q86UN6 197 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 C9orf62Q8N4C0 152 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 KLHL30-AS1Q8NEE0 82 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 OR5C1Q8NGR4 320 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 DCUN1D4Q92564 292 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 CXorf58Q96LI9 332 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 MGST2Q99735 147 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 TXN2Q99757 166 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 GGACTQ9BVM4 153 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 PEF1Q9UBV8 284 aaKnown RBP5.51□□□□□ -1.53
TRAF3-206ENST00000558880 FBXL17Q9UF56 701 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 WDR83OSQ9Y284 106 aa5.51□□□□□ -1.53
TRAF3-206ENST00000558880 FXYD6-FXYD2A0A087WZ82 144 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 TRBV7-1A0A0A6YYK4 115 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 A0A0G2JLM5 398 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 OR2T8A6NH00 312 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 CCL24O00175 119 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 ARPC5O15511 151 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 OR2C1O95371 312 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 RLN2P04090 185 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 HSPB1P04792 205 aaKnown RBP5.5□□□□□ -1.53
TRAF3-206ENST00000558880 LINC00869P0C866 280 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 NKX2-5P52952 324 aaPredicted RBP5.5□□□□□ -1.53
TRAF3-206ENST00000558880 SUB1P53999 127 aaKnown RBP eCLIP5.5□□□□□ -1.53
TRAF3-206ENST00000558880 MFAP4P55083 255 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 RAB11AP62491 216 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 BAXQ07812 192 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 FGL1Q08830 312 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 SLC38A11Q08AI6 406 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 NSUN5P1Q3KNT7 163 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 IGFL4Q6B9Z1 124 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM144Q7Z5S9 345 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 ZNF546Q86UE3 836 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 KCNRGQ8N5I3 272 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 OR11H1Q8NG94 326 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 OR10P1Q8NGE3 313 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 OR1N2Q8NGR9 330 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 THAP6Q8TBB0 222 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 DLX4Q92988 240 aaPredicted RBP5.5□□□□□ -1.53
TRAF3-206ENST00000558880 EEF1AKMT3Q96AZ1 226 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 ACY3Q96HD9 319 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 C17orf77Q96MU5 243 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 SMIM3Q9BZL3 60 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 ARV1Q9H2C2 271 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 THYN1Q9P016 225 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 SLC45A2Q9UMX9 530 aa5.5□□□□□ -1.53
TRAF3-206ENST00000558880 IGHV3-35A0A0C4DH35 117 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 WI2-2373I1.2A0A1W2PRP0 233 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM213A2RRL7 107 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 BOLA2-SMG1P6H3BVE0 249 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 SCAF4O95104 1147 aaKnown RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 PSG1P11464 419 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 PVALBP20472 110 aaPredicted RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 HOXD3P31249 432 aaPredicted RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 S100A11P31949 105 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 MYCNOSP40205 109 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 ZNF345Q14585 488 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 CLINT1Q14677 625 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 USF2Q15853 346 aaPredicted RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 TOMM20LQ6UXN7 152 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 PATE2Q6UY27 113 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 NOXA1Q86UR1 476 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 GPHB5Q86YW7 130 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 WFDC9Q8NEX5 89 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 ZNF503Q96F45 646 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 TRGV9Q99603 122 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM147Q9BVK8 224 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 GGTLC1Q9BX51 225 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 WDR61Q9GZS3 305 aaKnown RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 MFFQ9GZY8 342 aa5.49□□□□□ -1.53
TRAF3-206ENST00000558880 PAIP2BQ9ULR5 123 aaKnown RBP5.49□□□□□ -1.53
TRAF3-206ENST00000558880 RPS10-NUDT3A0A1W2PQS6 291 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 LINC01619G3V211 115 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 M0QZ24 198 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 AGPAT2O15120 278 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 GGCTO75223 188 aaKnown RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 YIF1AO95070 293 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 APOHP02749 345 aaPredicted RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 PET100P0DJ07 73 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 C8orf88P0DMB2 117 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 OR10J1P30954 320 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 ARL3P36405 182 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms