RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 COMMD5Q9GZQ3 224 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 RAB19A4D1S5 217 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 DLK1P80370 383 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 SERF2P84101 59 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 MRGPRG-AS1Q2M3A8 158 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 FAM210AQ96ND0 272 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 UQCC1Q9NVA1 299 aa12.12□□□□□ -0.47
CDC42BPB-203ENST00000558867 ZNF705EA8MWA4 302 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 MPDU1O75352 247 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 LY6G6CO95867 125 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 IFNA10P01566 189 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 NPY1RP25929 384 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPB-203ENST00000558867 PRSS8Q16651 343 aa12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 KRTAP17-1Q9BYP8 105 aa12.1□□□□□ -0.47
CDC42BPB-203ENST00000558867 IZUMO1RA6ND01 250 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 OR11H12B2RN74 326 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 PVRIGQ6DKI7 326 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 MARC2Q969Z3 335 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 SRD5A3Q9H8P0 318 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 WDR83OSQ9Y284 106 aa12.09□□□□□ -0.47
CDC42BPB-203ENST00000558867 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 CD300EQ496F6 205 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 Q6ZRG5 221 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 ZNF114Q8NC26 417 aa12.08□□□□□ -0.48
CDC42BPB-203ENST00000558867 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 CAMLGP49069 296 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 TMEM182Q6ZP80 229 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 TECRQ9NZ01 308 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-203ENST00000558867 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 FAM223BA6NKX1 122 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 TEX46H3BTG2 121 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 MBP02144 154 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 CD7P09564 240 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 MYOD1P15172 320 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 RPL27AP46776 148 aaKnown RBP12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 CACNG8Q8WXS5 425 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
CDC42BPB-203ENST00000558867 A0A1B0GW64 132 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 ZNF785A8K8V0 405 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 NDUFB8O95169 186 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 PRH1P02810 166 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 IFNA4P05014 189 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 FGF7P21781 194 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 SNCAP37840 140 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 RSG1Q9BU20 258 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 HINT2Q9BX68 163 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 NPCDR1Q9BY65 106 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-203ENST00000558867 IGLC7A0M8Q6 106 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 E7EUB6 86 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 ACTL6BO94805 426 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 HBE1P02100 147 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 WT1-ASQ06250 92 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 DEFB114Q30KQ6 69 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 TOR2AQ5JU69 321 aa12.04□□□□□ -0.48
CDC42BPB-203ENST00000558867 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms