RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ZNF90Q03938 601 aa9.77□□□□□ -0.85
VPS18-203ENST00000558855 KLF9Q13886 244 aaPredicted RBP9.77□□□□□ -0.85
VPS18-203ENST00000558855 DTD1Q8TEA8 209 aa9.77□□□□□ -0.85
VPS18-203ENST00000558855 Q8WTZ3 238 aa9.77□□□□□ -0.85
VPS18-203ENST00000558855 WDR12Q9GZL7 423 aaKnown RBP9.77□□□□□ -0.85
VPS18-203ENST00000558855 MCUBQ9NWR8 336 aa9.77□□□□□ -0.85
VPS18-203ENST00000558855 PKD1P98161 4303 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 PKHD1P08F94 4074 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 A0A0B4J2A0 478 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 PITX3O75364 302 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 IFNA10P01566 189 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 SPP1P10451 314 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 GAMTQ14353 236 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 ZNF79Q15937 498 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 C2CD4CQ8TF44 421 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 MFFQ9GZY8 342 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 SHPKQ9UHJ6 478 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 V9GYH0 126 aa9.76□□□□□ -0.85
VPS18-203ENST00000558855 IGLL5B9A064 214 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 H3BMM0 161 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 IAPPP10997 89 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 CCR6P51684 374 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 FXYD7P58549 80 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 MORN3Q6PF18 240 aaPredicted RBP9.75□□□□□ -0.85
VPS18-203ENST00000558855 SIGLEC15Q6ZMC9 328 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 HRH4Q9H3N8 390 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 NRN1Q9NPD7 142 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
VPS18-203ENST00000558855 FABP12A6NFH5 140 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 SOCS3O14543 225 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 IFNA4P05014 189 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 MIFP14174 115 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 OR2F1Q13607 317 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 LGI3Q8N145 548 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 MCFD2Q8NI22 146 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 PBDC1Q9BVG4 233 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 RSL24D1Q9UHA3 163 aaKnown RBP9.74□□□□□ -0.85
VPS18-203ENST00000558855 SCP2D1Q9UJQ7 156 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 TBC1D24Q9ULP9 559 aa9.74□□□□□ -0.85
VPS18-203ENST00000558855 PRSS46E5RG02 174 aa9.73□□□□□ -0.85
VPS18-203ENST00000558855 IGKV3-20P01619 116 aa9.73□□□□□ -0.85
VPS18-203ENST00000558855 EIF2B2P49770 351 aaKnown RBP9.73□□□□□ -0.85
VPS18-203ENST00000558855 TMEM182Q6ZP80 229 aaPredicted RBP9.73□□□□□ -0.85
VPS18-203ENST00000558855 TMED4Q7Z7H5 227 aa9.73□□□□□ -0.85
VPS18-203ENST00000558855 NARS2Q96I59 477 aaKnown RBP9.73□□□□□ -0.85
VPS18-203ENST00000558855 BCL7BQ9BQE9 202 aa9.73□□□□□ -0.85
VPS18-203ENST00000558855 KCNIP3Q9Y2W7 256 aa9.73□□□□□ -0.85
VPS18-203ENST00000558855 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 IGHV4-4A0A075B6R2 117 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 F6UB75 175 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 HLA-DRB4P13762 266 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 LYZP61626 148 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 ETFRF1Q6IPR1 90 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 C20orf173Q96LM9 149 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 U3KQ87 197 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 HLA-DRB4X5D2U9 266 aa9.72□□□□□ -0.85
VPS18-203ENST00000558855 ZFP92A6NM28 416 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
VPS18-203ENST00000558855 PPP1R1AQ13522 171 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 ZNF705AQ6ZN79 300 aaPredicted RBP9.71□□□□□ -0.86
VPS18-203ENST00000558855 MAGT1Q9H0U3 335 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 RABL2AQ9UBK7 228 aaPredicted RBP9.71□□□□□ -0.86
VPS18-203ENST00000558855 RABL2BQ9UNT1 228 aa9.71□□□□□ -0.86
VPS18-203ENST00000558855 TRAV10A0A0B4J240 114 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 ZNF705FA8MVS1 300 aaPredicted RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 ZNF705DP0CH99 300 aaPredicted RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 ZNF705BP0CI00 300 aaPredicted RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 VAMP1P23763 118 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 PYDC2Q56P42 97 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 LRTM2Q8N967 370 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 THAP8Q8NA92 274 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 SLC35E1Q96K37 410 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 RBM38Q9H0Z9 239 aaKnown RBP9.7□□□□□ -0.86
VPS18-203ENST00000558855 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 NACAE9PAV3 2078 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 RYR1P21817 5038 aa9.7□□□□□ -0.86
VPS18-203ENST00000558855 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 H3BP45 60 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 PRB4P10163 310 aaPredicted RBP9.69□□□□□ -0.86
VPS18-203ENST00000558855 GPX4P36969 197 aaPredicted RBP9.69□□□□□ -0.86
VPS18-203ENST00000558855 SNRPD3P62318 126 aaKnown RBP9.69□□□□□ -0.86
VPS18-203ENST00000558855 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 SCGB3A2Q96PL1 93 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 SLC25A32Q9H2D1 315 aa9.69□□□□□ -0.86
VPS18-203ENST00000558855 SAV1Q9H4B6 383 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms