RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
CUX1-217ENST00000558836 KCNIP4Q6PIL6 250 aa8.46□□□□□ -1.06
CUX1-217ENST00000558836 HIST3H2BBQ8N257 126 aa8.46□□□□□ -1.06
CUX1-217ENST00000558836 ITLN2Q8WWU7 325 aaPredicted RBP8.46□□□□□ -1.06
CUX1-217ENST00000558836 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.06
CUX1-217ENST00000558836 WNT10AQ9GZT5 417 aa8.46□□□□□ -1.06
CUX1-217ENST00000558836 LRRK2Q5S007 2527 aa8.46□□□□□ -1.06
CUX1-217ENST00000558836 USP9YO00507 2555 aaPredicted RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 NCBP2LA6PVI3 153 aaKnown RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 GGCTO75223 188 aaKnown RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 S100A2P29034 98 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 GNG5P63218 68 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 PYY3Q5JQD4 70 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 VMO1Q7Z5L0 202 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 NEU4Q8WWR8 484 aaPredicted RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 PFDN5Q99471 154 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 AMMECR1Q9Y4X0 333 aaPredicted RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 TOX4O94842 621 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 CA1P00915 261 aaPredicted RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 RBP4P02753 201 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 SRP14P37108 136 aaKnown RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 TCL1AP56279 114 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 IMMP2LQ96T52 175 aa8.45□□□□□ -1.06
CUX1-217ENST00000558836 F11RQ9Y624 299 aaKnown RBP8.45□□□□□ -1.06
CUX1-217ENST00000558836 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 THAP8Q8NA92 274 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 OR1P1Q8NH06 330 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 FSTL3O95633 263 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 LYZP61626 148 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 CFHR4Q92496 578 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 ZNF462Q96JM2 2506 aa8.44□□□□□ -1.06
CUX1-217ENST00000558836 CRYGCP07315 174 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 CBLN1P23435 193 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 PRTN3P24158 256 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 TIGITQ495A1 244 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 DTX2Q86UW9 622 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 OR11H6Q8NGC7 330 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 FXYD5Q96DB9 178 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 SERTAD4Q9NUC0 356 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 DOPEY1Q5JWR5 2465 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 ZANQ9Y493 2812 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 NBR2O15453 112 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 PSG1P11464 419 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 DEFA6Q01524 100 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 OR1L4Q8NGR5 311 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 C22orf15Q8WYQ4 148 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 MRPL32Q9BYC8 188 aaKnown RBP8.43□□□□□ -1.06
CUX1-217ENST00000558836 BPESC1Q9GZL8 116 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 EPG5Q9HCE0 2579 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 USP24Q9UPU5 2620 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 IGHV3-23P01764 117 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 CD99P14209 185 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 ACTL10Q5JWF8 245 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 PRR31Q5SQ13 230 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 ETFRF1Q6IPR1 90 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 OR8I2Q8N0Y5 310 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 TMEM116Q8NCL8 245 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 ABCA2Q9BZC7 2435 aa8.43□□□□□ -1.06
CUX1-217ENST00000558836 A0A1B0GV90 55 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 A0A1W2PRE2 83 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 GRIFINA4D1Z8 144 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 SELENOTP62341 195 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 FOXL1Q12952 345 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 TCEAL7Q9BRU2 100 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 ISLRO14498 428 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 BCL6BQ8N143 479 aaPredicted RBP8.42□□□□□ -1.06
CUX1-217ENST00000558836 FAM168AQ92567 244 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 PITPNC1Q9UKF7 332 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 V9GYV3 84 aa8.42□□□□□ -1.06
CUX1-217ENST00000558836 IGHV3OR16-10A0A075B7F0 116 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 PGPA6NDG6 321 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 SH2D7A6NKC9 451 aaPredicted RBP8.41□□□□□ -1.06
CUX1-217ENST00000558836 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 C9JCJ5 164 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 I3L2K1 104 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 HYPMO75409 117 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 IGLC1P0CG04 106 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
CUX1-217ENST00000558836 NDPQ00604 133 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 MRPL41Q8IXM3 137 aaKnown RBP8.41□□□□□ -1.06
CUX1-217ENST00000558836 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
CUX1-217ENST00000558836 M0R1W7 72 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 TGOLN2O43493 480 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 CEACAM3P40198 252 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 IER3P46695 156 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 FAM120AOSQ5T036 256 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 TRGV9Q99603 122 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 ASCL2Q99929 193 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
CUX1-217ENST00000558836 J3KRW8 73 aa8.4□□□□□ -1.06
CUX1-217ENST00000558836 K7EIM0 57 aa8.4□□□□□ -1.06
CUX1-217ENST00000558836 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms