RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 SLC35E1Q96K37 410 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 UBQLN2Q9UHD9 624 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 U3KQE9 123 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 RYR1P21817 5038 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 HELTA6NFD8 242 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 PLA2G10O15496 165 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 LYRM1O43325 122 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
RPL28-206ENST00000558752 HNRNPCP07910 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
RPL28-206ENST00000558752 NUP62P37198 522 aaPredicted RBP11.26□□□□□ -0.61
RPL28-206ENST00000558752 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
RPL28-206ENST00000558752 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 FLVCR2Q9UPI3 526 aa11.26□□□□□ -0.61
RPL28-206ENST00000558752 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 CFDP00746 253 aaPredicted RBP11.25□□□□□ -0.61
RPL28-206ENST00000558752 BTCP35070 178 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 GAMTQ14353 236 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 OR51G1Q8NGK1 321 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 GATAD1Q8WUU5 269 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
RPL28-206ENST00000558752 KIAA1109Q2LD37 5005 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 A6NHS1 94 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 WRBO00258 174 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 IAPPP10997 89 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 PSG1P11464 419 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
RPL28-206ENST00000558752 ANXA7P20073 488 aaKnown RBP11.24□□□□□ -0.61
RPL28-206ENST00000558752 P2RY1P47900 373 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 TFPI2P48307 235 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 TCTAP57738 103 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 GBGT1Q8N5D6 347 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
RPL28-206ENST00000558752 RABAC1Q9UI14 185 aa11.24□□□□□ -0.61
RPL28-206ENST00000558752 STRAPQ9Y3F4 350 aaKnown RBP11.24□□□□□ -0.61
RPL28-206ENST00000558752 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 SNRPGP15A8MWD9 76 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 TCRBP04435 133 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 IL4P05112 153 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 NKX2-1P43699 371 aaPredicted RBP11.23□□□□□ -0.61
RPL28-206ENST00000558752 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPL28-206ENST00000558752 OR8G2PQ6IF36 304 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 RPP25LQ8N5L8 163 aaKnown RBP11.23□□□□□ -0.61
RPL28-206ENST00000558752 TRGV9Q99603 122 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
RPL28-206ENST00000558752 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 ADAP1O75689 374 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 S100A7P31151 101 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 MZT2BQ6NZ67 158 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 RARRES2Q99969 163 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 MAGT1Q9H0U3 335 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 C20orf85Q9H1P6 137 aa11.22□□□□□ -0.61
RPL28-206ENST00000558752 PAIP2BQ9ULR5 123 aaKnown RBP11.22□□□□□ -0.61
RPL28-206ENST00000558752 K7EQG2 157 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 BUB3O43684 328 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 TAS2R30P59541 319 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 C1orf194Q5T5A4 169 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 APRG1Q8IVJ8 170 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 GLMPQ8WWB7 406 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 RNF125Q96EQ8 232 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 RAB40CQ96S21 281 aa11.21□□□□□ -0.61
RPL28-206ENST00000558752 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 FAM240BA0A1B0GVZ2 78 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPL28-206ENST00000558752 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
RPL28-206ENST00000558752 IAH1Q2TAA2 248 aaPredicted RBP11.2□□□□□ -0.62
RPL28-206ENST00000558752 STXBP6Q8NFX7 210 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 C2CD4CQ8TF44 421 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 WDR12Q9GZL7 423 aaKnown RBP11.2□□□□□ -0.62
RPL28-206ENST00000558752 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
RPL28-206ENST00000558752 BATF3Q9NR55 127 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 PSENENQ9NZ42 101 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 FBXL17Q9UF56 701 aa11.2□□□□□ -0.62
RPL28-206ENST00000558752 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 PRSS46E5RG02 174 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 FNDC10F2Z333 226 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 DEDDO75618 318 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 H2AFB2P0C5Z0 115 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 DEFB131AP59861 70 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 ZNF90Q03938 601 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 ZNF846Q147U1 533 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 TMEM144Q7Z5S9 345 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
RPL28-206ENST00000558752 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 PTTG2Q9NZH5 202 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 SLC45A2Q9UMX9 530 aa11.19□□□□□ -0.62
RPL28-206ENST00000558752 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms