RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ZNF2Q9BSG1 426 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-206ENST00000558739 TMEM70Q9BUB7 260 aa8.09□□□□□ -1.11
SMAD3-206ENST00000558739 WDR12Q9GZL7 423 aaKnown RBP8.09□□□□□ -1.11
SMAD3-206ENST00000558739 SAV1Q9H4B6 383 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-206ENST00000558739 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
SMAD3-206ENST00000558739 IGKV1-17P01599 117 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 AZU1P20160 251 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 RCVRNP35243 200 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 HRH1P35367 487 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 NKX2-1P43699 371 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-206ENST00000558739 NPBWR1P48145 328 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 TMBIM6P55061 237 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-206ENST00000558739 ERVK-16P61578 105 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 CATR1Q13166 79 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 SPCS2Q15005 226 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 ZNF79Q15937 498 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 TIGITQ495A1 244 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 CADM3Q8N126 398 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 OR4C16Q8NGL9 310 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 OR5H2Q8NGV7 314 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 FCAMRQ8WWV6 532 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 TMEM56Q96MV1 263 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 MIXL1Q9H2W2 232 aa8.08□□□□□ -1.12
SMAD3-206ENST00000558739 PGLYRP1O75594 196 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-206ENST00000558739 RLN1P04808 185 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 HLA-DMAP28067 261 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 ASIPP42127 132 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 UCP3P55916 312 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 HERV-K104P61576 105 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 MLANAQ16655 118 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 FAM78BQ5VT40 261 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 SNX29P2Q8IUI4 249 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 CLVS1Q8IUQ0 354 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-206ENST00000558739 OR6F1Q8NGZ6 308 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 DYNC2LI1Q8TCX1 351 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 RAB2BQ8WUD1 216 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 GNPNAT1Q96EK6 184 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-206ENST00000558739 LINC00052Q96N35 136 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 ABHD1Q96SE0 405 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 TMEM208Q9BTX3 173 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 MAGT1Q9H0U3 335 aa8.07□□□□□ -1.12
SMAD3-206ENST00000558739 FAM212BQ9NTI7 297 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-206ENST00000558739 FAM25AB3EWG3 89 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 FAM25CB3EWG5 89 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 FAM25GB3EWG6 89 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 GPR31O00270 319 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 F2RP25116 425 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 RPL5P46777 297 aaKnown RBP8.06□□□□□ -1.12
SMAD3-206ENST00000558739 PSG9Q00887 426 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 OR5I1Q13606 314 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 LPCAT3Q6P1A2 487 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 C15orf40Q8WUR7 153 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 EXTL2Q9UBQ6 330 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 MTFP1Q9UDX5 166 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 PRNDQ9UKY0 176 aa8.06□□□□□ -1.12
SMAD3-206ENST00000558739 CTDSP2O14595 271 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 SNAPC5O75971 98 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 OXTP01178 125 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 TBPP20226 339 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 HOXA5P20719 270 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 LPAR6P43657 344 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
SMAD3-206ENST00000558739 SIGLEC15Q6ZMC9 328 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 CMTM1Q8IZ96 169 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 OR52I2Q8NH67 350 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 TMEM230Q96A57 120 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 NARS2Q96I59 477 aaKnown RBP8.05□□□□□ -1.12
SMAD3-206ENST00000558739 CCDC59Q9P031 241 aaKnown RBP8.05□□□□□ -1.12
SMAD3-206ENST00000558739 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
SMAD3-206ENST00000558739 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 CBY3A6NI87 242 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 ZNF701M0R085 212 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-206ENST00000558739 M0R2Z0 102 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 HNRNPCP07910 306 aaKnown RBP eCLIP8.04□□□□□ -1.127e-8■□□□□ 10.3
SMAD3-206ENST00000558739 TSPAN5P62079 268 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 PRCDQ00LT1 54 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
SMAD3-206ENST00000558739 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 BAP18Q8IXM2 172 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 ARRDC1Q8N5I2 433 aa8.04□□□□□ -1.12
SMAD3-206ENST00000558739 SLIRPQ9GZT3 109 aaKnown RBP8.04□□□□□ -1.12
SMAD3-206ENST00000558739 H3BMQ9 156 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 GABARAPH6UMI1 98 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 SOCS3O14543 225 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 CTDSPLO15194 276 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 SIVA1O15304 175 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-206ENST00000558739 CLN5O75503 358 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 CD3DP04234 171 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 M6PRP20645 277 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 HOXA1P49639 335 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-206ENST00000558739 RND3P61587 244 aa8.03□□□□□ -1.12
SMAD3-206ENST00000558739 MRPS10P82664 201 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms