RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 IL4P05112 153 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 SPP1P10451 314 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 C4BPBP20851 252 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
CASC4-205ENST00000558735 SMCO1Q147U7 214 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 RBKSQ9H477 322 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 MCUBQ9NWR8 336 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 CLEC5AQ9NY25 188 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 SHPKQ9UHJ6 478 aa8.34□□□□□ -1.07
CASC4-205ENST00000558735 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
CASC4-205ENST00000558735 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
CASC4-205ENST00000558735 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PRR20EP86478 221 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PRR20CP86479 221 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PRR20DP86480 221 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PRR20BP86481 221 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PRR20AP86496 221 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 KLF9Q13886 244 aaPredicted RBP8.33□□□□□ -1.08
CASC4-205ENST00000558735 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 LGI3Q8N145 548 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 OR51G1Q8NGK1 321 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 HRH4Q9H3N8 390 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 APLNQ9ULZ1 77 aa8.33□□□□□ -1.08
CASC4-205ENST00000558735 IGKV1D-37A0A075B6S9 117 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 IGLL5B9A064 214 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 H3BMM0 161 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 H3BMQ9 156 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 PITX3O75364 302 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 MIFP14174 115 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 HLA-DMBP28068 263 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 GPX4P36969 197 aaPredicted RBP8.32□□□□□ -1.08
CASC4-205ENST00000558735 ZNF90Q03938 601 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 GAMTQ14353 236 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 SEPSECSQ9HD40 501 aaKnown RBP8.32□□□□□ -1.08
CASC4-205ENST00000558735 NRN1Q9NPD7 142 aa8.32□□□□□ -1.08
CASC4-205ENST00000558735 ATP5IP56385 69 aaPredicted RBP8.31□□□□□ -1.08
CASC4-205ENST00000558735 TCTAP57738 103 aa8.31□□□□□ -1.08
CASC4-205ENST00000558735 SIGLEC15Q6ZMC9 328 aa8.31□□□□□ -1.08
CASC4-205ENST00000558735 MCFD2Q8NI22 146 aa8.31□□□□□ -1.08
CASC4-205ENST00000558735 TBC1D24Q9ULP9 559 aa8.31□□□□□ -1.08
CASC4-205ENST00000558735 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 ANXA3P12429 323 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 DEFB1P60022 68 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 SNRPD3P62318 126 aaKnown RBP8.3□□□□□ -1.08
CASC4-205ENST00000558735 SRPXP78539 464 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 TMEM128Q5BJH2 165 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 Q6ZTC4 211 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 TRIM63Q969Q1 353 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 PBDC1Q9BVG4 233 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
CASC4-205ENST00000558735 XCL2Q9UBD3 114 aa8.3□□□□□ -1.08
CASC4-205ENST00000558735 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 ZFP92A6NM28 416 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 SNRPGP15A8MWD9 76 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 NKX2-1P43699 371 aaPredicted RBP8.29□□□□□ -1.08
CASC4-205ENST00000558735 NUTF2P61970 127 aaKnown RBP8.29□□□□□ -1.08
CASC4-205ENST00000558735 PYDC2Q56P42 97 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 GDF5OSQ5U4N7 250 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 GSG1LQ6UXU4 331 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 LRTM2Q8N967 370 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 V9GYH0 126 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 PKD1P98161 4303 aa8.29□□□□□ -1.08
CASC4-205ENST00000558735 TRAV10A0A0B4J240 114 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 IAPPP10997 89 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 SLC25A6P12236 298 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 HLA-DRB4P13762 266 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 OR2F1Q13607 317 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 ZNF79Q15937 498 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 OR8G2PQ6IF36 304 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 TOMM5Q8N4H5 51 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 SLC35E1Q96K37 410 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 TRGV9Q99603 122 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 C1QTNF4Q9BXJ3 329 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 HLA-DRB4X5D2U9 266 aa8.28□□□□□ -1.08
CASC4-205ENST00000558735 SOCS3O14543 225 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 NOL3O60936 208 aaKnown RBP8.27□□□□□ -1.09
CASC4-205ENST00000558735 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 FAUP35544 74 aaKnown RBP8.27□□□□□ -1.09
CASC4-205ENST00000558735 LYZP61626 148 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 RAB11AP62491 216 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 C1orf194Q5T5A4 169 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 ZNF767PQ75MW2 155 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 LINC00052Q96N35 136 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 SLC25A21Q9BQT8 299 aaPredicted RBP8.27□□□□□ -1.09
CASC4-205ENST00000558735 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
CASC4-205ENST00000558735 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms