RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RLN2P04090 185 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 DLK1P80370 383 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 RBPMS2Q6ZRY4 209 aaKnown RBP10.8□□□□□ -0.68
USP3-205ENST00000557884 TMEM217Q8N7C4 229 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 OR51G1Q8NGK1 321 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 ST8SIA2Q92186 375 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 METTL26Q96S19 204 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 RNF2Q99496 336 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 TRGV9Q99603 122 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
USP3-205ENST00000557884 NPPCP23582 126 aa10.79□□□□□ -0.68
USP3-205ENST00000557884 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
USP3-205ENST00000557884 USF2Q15853 346 aaPredicted RBP10.79□□□□□ -0.68
USP3-205ENST00000557884 TMEM252Q8N6L7 170 aa10.79□□□□□ -0.68
USP3-205ENST00000557884 OR11H7Q8NGC8 314 aa10.79□□□□□ -0.68
USP3-205ENST00000557884 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
USP3-205ENST00000557884 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 IGKV3-7A0A075B6H7 116 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 E5RGE8 158 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 FABP1P07148 127 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
USP3-205ENST00000557884 LYZP61626 148 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 LAMTOR1Q6IAA8 161 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 STX12Q86Y82 276 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 LILRB2Q8N423 598 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 RNF125Q96EQ8 232 aa10.78□□□□□ -0.68
USP3-205ENST00000557884 MPC2O95563 127 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 HNRNPCP07910 306 aaKnown RBP eCLIP10.77□□□□□ -0.699e-7■■■□□ 16.3
USP3-205ENST00000557884 CRYBB3P26998 211 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 BMI1P35226 326 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 SULT1A1P50225 295 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 CD81P60033 236 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
USP3-205ENST00000557884 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 NARS2Q96I59 477 aaKnown RBP10.77□□□□□ -0.69
USP3-205ENST00000557884 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 RABAC1Q9UI14 185 aa10.77□□□□□ -0.69
USP3-205ENST00000557884 LSM4Q9Y4Z0 139 aaKnown RBP10.77□□□□□ -0.69
USP3-205ENST00000557884 TRAV25A0A0B4J276 109 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 FNDC10F2Z333 226 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 DFFBO76075 338 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 CD7P09564 240 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 P2RY1P47900 373 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 TFPI2P48307 235 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 EWSR1Q01844 656 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP3-205ENST00000557884 CYP2G1PQ6ZSU1 146 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 Q8N1Y9 231 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 BPIFCQ8NFQ6 507 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 NEURL2Q9BR09 285 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 RNF126Q9BV68 326 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 GGACTQ9BVM4 153 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
USP3-205ENST00000557884 A0A1W2PS18 150 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 TSPAN4O14817 238 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 PET100P0DJ07 73 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
USP3-205ENST00000557884 NHLH2Q02577 135 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
USP3-205ENST00000557884 SLC25A31Q9H0C2 315 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 WFDC10AQ9H1F0 79 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 U3KQE9 123 aa10.75□□□□□ -0.69
USP3-205ENST00000557884 TGP01266 2768 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 UBE2L5PA0A1B0GUS4 154 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 ORM2P19652 201 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 S100A11P31949 105 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 EIF2B2P49770 351 aaKnown RBP10.74□□□□□ -0.69
USP3-205ENST00000557884 HBG1P69891 147 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 HBG2P69892 147 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 DOK5Q9P104 306 aa10.74□□□□□ -0.69
USP3-205ENST00000557884 SORL1Q92673 2214 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 CLINT1Q14677 625 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 STPG3Q8N7X2 389 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 OR1B1Q8NGR6 318 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 MGST2Q99735 147 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 UBQLN2Q9UHD9 624 aa10.73□□□□□ -0.69
USP3-205ENST00000557884 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
USP3-205ENST00000557884 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
USP3-205ENST00000557884 AGPAT2O15120 278 aa10.72□□□□□ -0.69
USP3-205ENST00000557884 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
USP3-205ENST00000557884 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
USP3-205ENST00000557884 LINC00869P0C866 280 aa10.72□□□□□ -0.69
USP3-205ENST00000557884 BAXQ07812 192 aa10.72□□□□□ -0.69
USP3-205ENST00000557884 VWC2Q2TAL6 325 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms