RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 TSPAN4O14817 238 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 MPDU1O75352 247 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 GIPP09681 153 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-234ENST00000557703 PSG1P11464 419 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 GP9P14770 177 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 AP2S1P53680 142 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-234ENST00000557703 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-234ENST00000557703 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 CD300EQ496F6 205 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-234ENST00000557703 BPIFCQ8NFQ6 507 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 CHAC2Q8WUX2 184 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 ZNF414Q96IQ9 312 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 RHPN1-AS1Q9BWJ2 59 aa10.35□□□□□ -0.75
SHMT2-234ENST00000557703 AURKAIP1Q9NWT8 199 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-234ENST00000557703 IGKV1D-37A0A075B6S9 117 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 TRAV2A0A0B4J234 112 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 CHEK1O14757 476 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 IL4P05112 153 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHMT2-234ENST00000557703 LYL1P12980 280 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 RAP2BP61225 183 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 PAFAH1B2P68402 229 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 SLC38A11Q08AI6 406 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 GTSCR1Q86UQ5 136 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 THAP6Q8TBB0 222 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 MLXQ9UH92 298 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
SHMT2-234ENST00000557703 U3KQE9 123 aa10.34□□□□□ -0.75
SHMT2-234ENST00000557703 IGKV1OR2-108A0A075B7D4 117 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 HELTA6NFD8 242 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 FAM24AA6NFZ4 105 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 CXCL3P19876 107 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 PLP1P60201 277 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 LRRC37A5PQ49AS3 106 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 LILRB2Q8N423 598 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 RNF126Q9BV68 326 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 TMEM147Q9BVK8 224 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 FBXL17Q9UF56 701 aa10.33□□□□□ -0.76
SHMT2-234ENST00000557703 ZNF785A8K8V0 405 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 A8MZ25 164 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 CST7O76096 145 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 FCN2Q15485 313 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 BTNL8Q6UX41 500 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 OR11H7Q8NGC8 314 aa10.32□□□□□ -0.76
SHMT2-234ENST00000557703 OR4C46A6NHA9 309 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 H0YIZ8 118 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 BUB3O43684 328 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 ZNF90Q03938 601 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 CYP2G1PQ6ZSU1 146 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 HAPLN4Q86UW8 402 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 GPR82Q96P67 336 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 SEPSECSQ9HD40 501 aaKnown RBP10.31□□□□□ -0.76
SHMT2-234ENST00000557703 OR5AC2Q9NZP5 309 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 WDR83OSQ9Y284 106 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 DNAH3Q8TD57 4116 aa10.31□□□□□ -0.76
SHMT2-234ENST00000557703 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-234ENST00000557703 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 DFFBO76075 338 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 RPL12P30050 165 aaKnown RBP10.3□□□□□ -0.76
SHMT2-234ENST00000557703 EWSR1Q01844 656 aaKnown RBP eCLIP10.3□□□□□ -0.76
SHMT2-234ENST00000557703 ARL16Q0P5N6 197 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-234ENST00000557703 TMEM217Q8N7C4 229 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 RNF2Q99496 336 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 KCNIP2Q9NS61 270 aa10.3□□□□□ -0.76
SHMT2-234ENST00000557703 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 K7EIL1 84 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 AGPAT2O15120 278 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
SHMT2-234ENST00000557703 CCNKO75909 580 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 RPL29P47914 159 aaKnown RBP10.29□□□□□ -0.76
SHMT2-234ENST00000557703 CAMLGP49069 296 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 NHLH2Q02577 135 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 Q6ZRG5 221 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 ST8SIA2Q92186 375 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 PARD6GQ9BYG4 376 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-234ENST00000557703 MBD2Q9UBB5 411 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 HSPB11Q9Y547 144 aa10.29□□□□□ -0.76
SHMT2-234ENST00000557703 HYPMO75409 117 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 LYZP61626 148 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 STPG3Q8N7X2 389 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 WDR89Q96FK6 387 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms