RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 TRAV8-6A0A0B4J262 113 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV1-24A0A0C4DH33 117 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1B0GV72 72 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1B0GW15 77 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 PSMB11A5LHX3 300 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 HIGD1CA8MV81 97 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 DEFB108AA8MXU0 73 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 GGTLC3B5MD39 225 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 C15orf65H3BRN8 121 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 UPK2O00526 184 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 P01737 135 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SLC25A5P05141 298 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SMIM13P0DJ93 91 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV3-43DP0DP04 118 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 FABP2P12104 132 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 PRDX2P32119 198 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 CSN1S1P47710 185 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 CYB561P49447 251 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 CAMPP49913 170 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SUB1P53999 127 aaKnown RBP eCLIP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 UBE2L3P68036 154 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ERHP84090 104 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SRYQ05066 204 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 RIGQ13278 110 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 POU2AF1Q16633 256 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 KIF26BQ2KJY2 2108 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM30BQ3MIR4 351 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF766Q5HY98 468 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 PIK3CD-AS1Q5SR53 167 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 TIMM23BQ5SRD1 257 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 FAM120AOSQ5T036 256 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 GDF5OSQ5U4N7 250 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 LYSMD4Q5XG99 296 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 UFSP1Q6NVU6 142 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ACP7Q6ZNF0 438 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 RBPMS2Q6ZRY4 209 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 Q6ZS52 159 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 NEGR1Q7Z3B1 354 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ERASQ7Z444 233 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SPATA12Q7Z6I5 190 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 LHFPL4Q7Z7J7 247 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF329Q86UD4 541 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 MDP1Q86V88 176 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 GCSAMQ8N6F7 178 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 KIR3DL3Q8N743 410 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 RBMXL3Q8N7X1 1067 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 C5orf17Q8NAS9 161 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 OR13A1Q8NGR1 328 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 OR1L8Q8NGR8 309 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 OR10AG1Q8NH19 301 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 H1FXQ92522 213 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SNRNP40Q96DI7 357 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 COQ2Q96H96 371 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 FMC1Q96HJ9 113 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF714Q96N38 554 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 GPR82Q96P67 336 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 FAM173AQ9BQD7 235 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 PIMREGQ9BSJ6 248 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 SLC25A33Q9BSK2 321 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 IFI27L2Q9H2X8 130 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 FNDC4Q9H6D8 234 aaPredicted RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 PLSCR4Q9NRQ2 329 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF355PQ9NSJ1 428 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM14BQ9NUH8 114 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ABI3Q9P2A4 366 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 GNG12Q9UBI6 72 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 EPDR1Q9UM22 224 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF257Q9Y2Q1 563 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM131Q92545 1883 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 LOC102724200A0A096LPH7 203 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TRAV3A0A0B4J244 114 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TRAV5A0A0B4J249 113 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 A0A0G2JLM5 398 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 A0A0G2JMM0 328 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TRBV6-1A0A0K0K1D8 114 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1W2PPB8 328 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1W2PPM0 123 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1W2PQM1 296 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM189A5PLL7 270 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PGPA6NDG6 321 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 KIR3DP1A8MWS1 328 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 C2CD4DB7Z1M9 353 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PPIAL4DF5H284 164 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 H3BUT2 72 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 RHODO00212 210 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 NKX2-8O15522 239 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 ZNHIT1O43257 154 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TIMM8AO60220 97 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SAP30O75446 220 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 KLF7O75840 302 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CER1O95813 267 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CA1P00915 261 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 RFPL3SP0C7P2 107 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A10P0DMU9 189 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms