RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 BSXQ3C1V8 233 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 UBE2NLQ5JXB2 153 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 SIGLEC15Q6ZMC9 328 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 SAMD12Q8N8I0 201 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 ZNF709Q8N972 641 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 TP53RKQ96S44 253 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 YTHDF2Q9Y5A9 579 aaKnown RBP6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 DNAH5Q8TE73 4624 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 RPS10-NUDT3A0A1W2PQS6 291 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 CCDC160A6NGH7 325 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 TMEM127O75204 238 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 OR10J1P30954 320 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 FAM3BP58499 235 aaPredicted RBP6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 CTAG1AP78358 180 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 SLC7A5P1Q8MH63 180 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 C6orf223Q8N319 242 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 OR4B1Q8NGF8 309 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 GPX8Q8TED1 209 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 LINC00052Q96N35 136 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 ATG101Q9BSB4 218 aa6.37□□□□□ -1.39
HNRNPC-227ENST00000556897 A0A0G2JRQ6 117 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 LOC102723971A0A1B0GUV8 181 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 HBE1P02100 147 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 TGFBR1P36897 503 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 PIGPP57054 158 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 DAD1P61803 113 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 TRIM16LQ309B1 348 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 SP6Q3SY56 376 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 GSG1LQ6UXU4 331 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 FOXI2Q6ZQN5 318 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 C1orf158Q8N1D5 194 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 C7orf50Q9BRJ6 194 aaKnown RBP6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 SLC35B3Q9H1N7 401 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 SAV1Q9H4B6 383 aaPredicted RBP6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 GOLT1BQ9Y3E0 138 aa6.36□□□□□ -1.39
HNRNPC-227ENST00000556897 C3orf85A0A1B0GTC6 90 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 M0QYG6 137 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 GSTZ1O43708 216 aaPredicted RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 ATG12O94817 140 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RD3LP0DJH9 198 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 SLC25A4P12235 298 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RCVRNP35243 200 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RPS19P39019 145 aaKnown RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 HTR2BP41595 481 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RORCP51449 518 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 SPCS3P61009 180 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RND3P61587 244 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 NEDD8Q15843 81 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RRN3P1Q2M238 152 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 SPATA12Q7Z6I5 190 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 SNX29P2Q8IUI4 249 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 OR51G1Q8NGK1 321 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 COQ8AQ8NI60 647 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RNASE11Q8TAA1 199 aaKnown RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 NPIPB3Q92617 1050 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RRNAD1Q96FB5 475 aaKnown RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 HEYLQ9NQ87 328 aaPredicted RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 RABL2AQ9UBK7 228 aaPredicted RBP6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 KLK11Q9UBX7 282 aa6.35□□□□□ -1.39
HNRNPC-227ENST00000556897 F6UB75 175 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 NXPH3O95157 252 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 NUDT3O95989 172 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 TOMM40O96008 361 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 PSG1P11464 419 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 PSMB3P49720 205 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 PSG9Q00887 426 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 ZNF79Q15937 498 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 C2orf83Q53S99 150 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 FAM78BQ5VT40 261 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 SLC24A4Q8NFF2 622 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 RNASEH2CQ8TDP1 164 aaKnown RBP6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 ZNF486Q96H40 463 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 ACY3Q96HD9 319 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 SCPEP1Q9HB40 452 aa6.34□□□□□ -1.39
HNRNPC-227ENST00000556897 A0A087WXM4 84 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 SOCS3O14543 225 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 PRM2P04554 102 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 DEFB130BP0DP73 79 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 DEFB130AP0DP74 79 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 UCP1P25874 307 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 ID1P41134 155 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 AARDQ4LEZ3 155 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 GPR141Q7Z602 305 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 LHFPL1Q86WI0 220 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms