RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 OR2F1Q13607 317 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 LINC00299Q6ZSB3 139 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 ACOT7LQ6ZUV0 252 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 ZBTB8BQ8NAP8 495 aaPredicted RBP7.68□□□□□ -1.18
SNX6-208ENST00000556712 MUC7Q8TAX7 377 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 RNF125Q96EQ8 232 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 CIB3Q96Q77 187 aaPredicted RBP7.68□□□□□ -1.18
SNX6-208ENST00000556712 RABAC1Q9UI14 185 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 RCL1Q9Y2P8 373 aaKnown RBP7.68□□□□□ -1.18
SNX6-208ENST00000556712 FAM240BA0A1B0GVZ2 78 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 A0A1W2PS18 150 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 DNASE2O00115 360 aaPredicted RBP7.67□□□□□ -1.18
SNX6-208ENST00000556712 UPK1BO75841 260 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 H2AFB2P0C5Z0 115 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 LYZP61626 148 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 PAFAH1B2P68402 229 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 IFITM3Q01628 133 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 ASAH1Q13510 395 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 ZNF846Q147U1 533 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 OR8G2PQ6IF36 304 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 C16orf54Q6UWD8 224 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 GSG1LQ6UXU4 331 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 ZNF431Q8TF32 576 aaPredicted RBP7.67□□□□□ -1.18
SNX6-208ENST00000556712 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
SNX6-208ENST00000556712 PSENENQ9NZ42 101 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 PLA2G2EQ9NZK7 142 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 GSKIPQ9P0R6 139 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 STRAPQ9Y3F4 350 aaKnown RBP7.67□□□□□ -1.18
SNX6-208ENST00000556712 U3KQE9 123 aa7.67□□□□□ -1.18
SNX6-208ENST00000556712 SMCO3A2RU48 225 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 FAM25EA8MYX2 175 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 K7EQG2 157 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 METTL15P1P0C7V9 234 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 ZNF688P0C7X2 276 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 PAX9P55771 341 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 DEFB131AP59861 70 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
SNX6-208ENST00000556712 AKR1C1Q04828 323 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 ZFAND6Q6FIF0 208 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 THAP8Q8NA92 274 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 ENKURQ8TC29 256 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 GRAMD2BQ96HH9 432 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 OVOL2Q9BRP0 275 aa7.66□□□□□ -1.18
SNX6-208ENST00000556712 NBEAL2Q6ZNJ1 2754 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 PMS2P5A8MQ11 134 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 BUB3O43684 328 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 MBPP02686 304 aaPredicted RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 CD5P06127 495 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 GATA2P23769 480 aaPredicted RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 EIF2B2P49770 351 aaKnown RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 APOC4P55056 127 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 RRAS2P62070 204 aaPredicted RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 MZT2BQ6NZ67 158 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 SIGLEC15Q6ZMC9 328 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 TMEM182Q6ZP80 229 aaPredicted RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 C12orf45Q8N5I9 185 aaPredicted RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 STPG3Q8N7X2 389 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 DCANP1Q8TF63 244 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 SMIM8Q96KF7 97 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 TRGV9Q99603 122 aa7.65□□□□□ -1.18
SNX6-208ENST00000556712 LSM5Q9Y4Y9 91 aaKnown RBP7.65□□□□□ -1.18
SNX6-208ENST00000556712 CSMD3Q7Z407 3707 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 TRAV2A0A0B4J234 112 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 C5orf51A6NDU8 294 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 HELTA6NFD8 242 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 C3orf84H3BNL1 204 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 CASC10Q5T4H9 136 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 TMEM14EPQ6UXP3 125 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 AGRNO00468 2067 aa7.64□□□□□ -1.19
SNX6-208ENST00000556712 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
SNX6-208ENST00000556712 C7orf66A4D0T2 115 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 KNCNA6PVL3 124 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 K7EPK0 472 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 FABP1P07148 127 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 LYL1P12980 280 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 CMC4P56277 68 aaPredicted RBP7.63□□□□□ -1.19
SNX6-208ENST00000556712 ARL16Q0P5N6 197 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 PSMG4Q5JS54 123 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 NRARPQ7Z6K4 114 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 RAB40CQ96S21 281 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 BATF3Q9NR55 127 aa7.63□□□□□ -1.19
SNX6-208ENST00000556712 DYNC2H1Q8NCM8 4307 aaKnown RBP7.62□□□□□ -1.19
SNX6-208ENST00000556712 KIR2DL5BA0A0G2JN68 375 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 KIR2DL5BA0A0G2JPC4 375 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 SNRPGP15A8MWD9 76 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 L7N2F9 121 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 SPRY2O43597 315 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 TSC22D2O75157 780 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 CA1P00915 261 aaPredicted RBP7.62□□□□□ -1.19
SNX6-208ENST00000556712 IL5P05113 134 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 S100A10P60903 97 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 VAMP2P63027 116 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 DLK1P80370 383 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 Q6ZWC4 215 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 KIR2DL5AQ8N109 375 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms