RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
ACTN1-221ENST00000556571 SRRQ9GZT4 340 aa8.53□□□□□ -1.04
ACTN1-221ENST00000556571 CDS2O95674 445 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 HOXA1P49639 335 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-221ENST00000556571 EIF2B2P49770 351 aaKnown RBP8.52□□□□□ -1.05
ACTN1-221ENST00000556571 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 UBE2DNLQ8IWF7 75 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 GLYATL2Q8WU03 294 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 FAM210BQ96KR6 192 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
ACTN1-221ENST00000556571 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 LINC00854A0A1B0GVQ3 168 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 HELTA6NFD8 242 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 NAP1L6A6NFF2 107 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 CORTO00230 105 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 CLN5O75503 358 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 SCGB2A1O75556 95 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 SPART-AS1P0CW21 52 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 VAMP1P23763 118 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 AP2S1P53680 142 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-221ENST00000556571 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
ACTN1-221ENST00000556571 DHRS2Q13268 280 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 TMEM128Q5BJH2 165 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 PSMG4Q5JS54 123 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 Q6ZRM9 215 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 IL22RA2Q969J5 263 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
ACTN1-221ENST00000556571 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-221ENST00000556571 A0A0B4J293 547 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 TMEM189A5PLL7 270 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 INS-IGF2F8WCM5 200 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 BAK1Q16611 211 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 RNF212Q495C1 297 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 SPINK9Q5DT21 86 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 SELENOHQ8IZQ5 122 aaKnown RBP8.5□□□□□ -1.05
ACTN1-221ENST00000556571 LGI3Q8N145 548 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 OR4X1Q8NH49 305 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 NEU1Q99519 415 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 CACNG5Q9UF02 275 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 TMEM56-RWDD3S4R434 201 aa8.5□□□□□ -1.05
ACTN1-221ENST00000556571 P0C879 139 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 SULT1A3P0DMM9 295 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 SULT1A4P0DMN0 295 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 SPCS3P61009 180 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
ACTN1-221ENST00000556571 LHFPL5Q8TAF8 219 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
ACTN1-221ENST00000556571 U3KQE9 123 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 HSPG2P98160 4391 aa8.49□□□□□ -1.05
ACTN1-221ENST00000556571 TRAV30A0A087WSZ9 112 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 A0A0B4J2A0 478 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 TEX48A0A1B0GUV7 120 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 CEBPZOSA8MTT3 80 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 H3BMM0 161 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 RNASE2P10153 161 aaKnown RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 IL7P13232 177 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 OPRK1P41145 380 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 CCR6P51684 374 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 EMP1P54849 157 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 S100ZQ8WXG8 99 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 GPR146Q96CH1 333 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 C7orf50Q9BRJ6 194 aaKnown RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 PRR13Q9NZ81 148 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 MRPL36Q9P0J6 103 aaKnown RBP8.48□□□□□ -1.05
ACTN1-221ENST00000556571 SHPKQ9UHJ6 478 aa8.48□□□□□ -1.05
ACTN1-221ENST00000556571 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 ZNF705FA8MVS1 300 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-221ENST00000556571 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 NDUFB6O95139 128 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
ACTN1-221ENST00000556571 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-221ENST00000556571 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-221ENST00000556571 HTR2BP41595 481 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 SUPT4H1P63272 117 aaKnown RBP8.47□□□□□ -1.05
ACTN1-221ENST00000556571 MLANAQ16655 118 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 CNPY1Q3B7I2 92 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 TIGITQ495A1 244 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 C16orf54Q6UWD8 224 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 LINC00299Q6ZSB3 139 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 LYZL2Q7Z4W2 148 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 Q8WTZ3 238 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 GLMPQ8WWB7 406 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 BATF3Q9NR55 127 aa8.47□□□□□ -1.05
ACTN1-221ENST00000556571 A6NHS1 94 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 NXPH3O95157 252 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 SFT2D2O95562 160 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 UBE2MP61081 183 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms