RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
SRP54-211ENST00000556445 REG4Q9BYZ8 158 aa4□□□□□ -1.77
SRP54-211ENST00000556445 PARP12Q9H0J9 701 aaKnown RBP4□□□□□ -1.77
SRP54-211ENST00000556445 SMDT1Q9H4I9 107 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CBLN4Q9NTU7 201 aa4□□□□□ -1.77
SRP54-211ENST00000556445 FKBP11Q9NYL4 201 aa4□□□□□ -1.77
SRP54-211ENST00000556445 MDFICQ9P1T7 246 aa4□□□□□ -1.77
SRP54-211ENST00000556445 ARID1AO14497 2285 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 IGSF23A1L1A6 192 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 CEBPZOSA8MTT3 80 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PRAC2D3DTV9 90 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 H7C2Y5 167 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 S1PR2O95136 353 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 GCGP01275 180 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PRH1P02810 166 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 M6PRP20645 277 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 NFYBP25208 207 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 G6PCP35575 357 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 DYNLT3P51808 116 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PAX9P55771 341 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 RANP62826 216 aaKnown RBP3.99□□□□□ -1.77
SRP54-211ENST00000556445 RPL30P62888 115 aaKnown RBP3.99□□□□□ -1.77
SRP54-211ENST00000556445 GAGE5Q13069 117 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 GAGE6Q13070 117 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 LY6DQ14210 128 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 LTC4SQ16873 150 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 TMEM155Q4W5P6 130 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 SPRNQ5BIV9 151 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 FAM74A1Q5RGS3 127 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 FAM201AQ5SY85 155 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 AKR1C8PQ5T2L2 129 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 LINC00242Q5T6M2 205 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 GFI1BQ5VTD9 330 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 ZNF429Q86V71 674 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PUSL1Q8N0Z8 303 aaKnown RBP3.99□□□□□ -1.77
SRP54-211ENST00000556445 FAM216BQ8N7L0 139 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 ZNF439Q8NDP4 499 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR8B3Q8NGG8 313 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR2D3Q8NGH3 330 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR5C1Q8NGR4 320 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR2G3Q8NGZ4 309 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 VSTM2AQ8TAG5 236 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 H1FXQ92522 213 aaKnown RBP3.99□□□□□ -1.77
SRP54-211ENST00000556445 OR8B2Q96RD0 313 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PSMG3Q9BT73 122 aaPredicted RBP3.99□□□□□ -1.77
SRP54-211ENST00000556445 SMIM3Q9BZL3 60 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 IFI27L2Q9H2X8 130 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 ENY2Q9NPA8 101 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 PRNDQ9UKY0 176 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 FBXO7Q9Y3I1 522 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 USF3Q68DE3 2245 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 ARFGEF3Q5TH69 2177 aa3.99□□□□□ -1.77
SRP54-211ENST00000556445 RAI1Q7Z5J4 1906 aaPredicted RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 SPTA1P02549 2419 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IGHV4-61A0A0C4DH41 118 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 C17orf112F2Z3M2 114 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SMKR1H3BMG3 65 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 BMPR1BO00238 502 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 CST7O76096 145 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SNAPINO95295 136 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IFNA17P01571 189 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IGLV2-11P01706 119 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 TFF1P04155 84 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IGHV4-38-2P0DP08 117 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 IAPPP10997 89 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 ATP6V0CP27449 155 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 RAB13P51153 203 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 GNB2P62879 340 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 TFF3Q07654 80 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SLC38A11Q08AI6 406 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 CLINT1Q14677 625 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 PEA15Q15121 130 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SPANXN5Q5MJ07 72 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 TMEM14EPQ6UXP3 125 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 S100A7AQ86SG5 101 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SMIM29Q86T20 159 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 CBLN2Q8IUK8 224 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 LYG1Q8N1E2 194 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 ZNF525Q8N782 197 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 ZNF709Q8N972 641 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 HSD17B11Q8NBQ5 300 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 OR10X1Q8NGY0 326 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 OR4A5Q8NH83 315 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 OR9G1Q8NH87 305 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 PCNPQ8WW12 178 aaKnown RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 RBMXL1Q96E39 390 aaKnown RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 NARS2Q96I59 477 aaKnown RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 TMEM147Q9BVK8 224 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 GGACTQ9BVM4 153 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 SPANXB1Q9NS25 103 aaPredicted RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 ZNF257Q9Y2Q1 563 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 AMMECR1Q9Y4X0 333 aaPredicted RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 TIMM9Q9Y5J7 89 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms