RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 OR4C16Q8NGL9 310 aa9.74□□□□□ -0.85
ACTN1-219ENST00000556432 S100A16Q96FQ6 103 aaKnown RBP9.74□□□□□ -0.85
ACTN1-219ENST00000556432 PBDC1Q9BVG4 233 aa9.74□□□□□ -0.85
ACTN1-219ENST00000556432 KLK11Q9UBX7 282 aa9.74□□□□□ -0.85
ACTN1-219ENST00000556432 ANAPC10Q9UM13 185 aa9.74□□□□□ -0.85
ACTN1-219ENST00000556432 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-219ENST00000556432 SLC25A4P12235 298 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 NUP62P37198 522 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-219ENST00000556432 SPATA31B1PQ5VZV4 182 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 OR51G1Q8NGK1 321 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 YIPF6Q96EC8 236 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 ACY3Q96HD9 319 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
ACTN1-219ENST00000556432 TOMM40O96008 361 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 ATP5G1P05496 136 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 NAT1P18440 290 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
ACTN1-219ENST00000556432 HTR2BP41595 481 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 ATP5G3P48201 142 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
ACTN1-219ENST00000556432 TRIM16LQ309B1 348 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 NPIPB3Q92617 1050 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 RRNAD1Q96FB5 475 aaKnown RBP9.72□□□□□ -0.85
ACTN1-219ENST00000556432 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
ACTN1-219ENST00000556432 HEYLQ9NQ87 328 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-219ENST00000556432 PRM2P04554 102 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 P0C879 139 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 PI3P19957 117 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 PRSS3P35030 304 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 FCN2Q15485 313 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 UBE2NLQ5JXB2 153 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 LYSMD2Q8IV50 215 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 GPR146Q96CH1 333 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 TP53RKQ96S44 253 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 ABHD1Q96SE0 405 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 VCX3AQ9NNX9 186 aa9.71□□□□□ -0.86
ACTN1-219ENST00000556432 A0A0J9YX75 114 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 INSP01308 110 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 PSG1P11464 419 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 PAX9P55771 341 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 RNASEH2CQ8TDP1 164 aaKnown RBP9.7□□□□□ -0.86
ACTN1-219ENST00000556432 PPP1R14BQ96C90 147 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 RNF125Q96EQ8 232 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 UHRF2Q96PU4 802 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 NAA50Q9GZZ1 169 aaKnown RBP9.7□□□□□ -0.86
ACTN1-219ENST00000556432 Q9H3A6 140 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 DOK5Q9P104 306 aa9.7□□□□□ -0.86
ACTN1-219ENST00000556432 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 J3QL48 77 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 EREGO14944 169 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 RCVRNP35243 200 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
ACTN1-219ENST00000556432 UCP3P55916 312 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 PIGPP57054 158 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 SPCS3P61009 180 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 NCS1P62166 190 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 SAMD12Q8N8I0 201 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 SLC24A4Q8NFF2 622 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 FUNDC2Q9BWH2 189 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 ZNF586Q9NXT0 402 aa9.69□□□□□ -0.86
ACTN1-219ENST00000556432 A0A0G2JRQ6 117 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 C3orf85A0A1B0GTC6 90 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 CBY3A6NI87 242 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 M0R2Z0 102 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 ISLRO14498 428 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 SOCS3O14543 225 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 RND3P61587 244 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 SP6Q3SY56 376 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 GNPNAT1Q96EK6 184 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-219ENST00000556432 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
ACTN1-219ENST00000556432 MRPS26Q9BYN8 205 aaKnown RBP9.68□□□□□ -0.86
ACTN1-219ENST00000556432 A0A1W2PPQ1 181 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 NXPH3O95157 252 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 XGP55808 180 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 LYZP61626 148 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 SUPT4H1P63272 117 aaKnown RBP9.67□□□□□ -0.86
ACTN1-219ENST00000556432 OR5I1Q13606 314 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 OR8G2PQ6IF36 304 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 BAP18Q8IXM2 172 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 OR8I2Q8N0Y5 310 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 MDFICQ9P1T7 246 aa9.67□□□□□ -0.86
ACTN1-219ENST00000556432 ZFP92A6NM28 416 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 HTN1P15515 57 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 TSPOP30536 169 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 LINC00315P59091 139 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 VBP1P61758 197 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 B2MP61769 119 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms