RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 MFFQ9GZY8 342 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 ZFAND3Q9H8U3 227 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 TMEM213A2RRL7 107 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 RNF222A6NCQ9 220 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 A8MWP6 167 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 AGPAT2O15120 278 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 DFFBO76075 338 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 FOLR2P14207 255 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 CAMLGP49069 296 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 CD300CQ08708 224 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 RAB31Q13636 194 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 TMEM182Q6ZP80 229 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 BPIFCQ8NFQ6 507 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 MGST2Q99735 147 aa10.69□□□□□ -0.7
VIPAS39-208ENST00000556412 IFNA5P01569 189 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 CSN3P07498 182 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 CBLN1P23435 193 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 IL34Q6ZMJ4 242 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 WFDC1Q9HC57 220 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 LSM4Q9Y4Z0 139 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 ORM2P19652 201 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 USF2Q15853 346 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 SCGB1C1Q8TD33 95 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 METTL26Q96S19 204 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 DOK5Q9P104 306 aa10.68□□□□□ -0.7
VIPAS39-208ENST00000556412 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 K7EMT4 169 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 LINC00869P0C866 280 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 NPPCP23582 126 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 ELLP55199 621 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 SELENOTP62341 195 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 OR1B1Q8NGR6 318 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 VWFP04275 2813 aa10.67□□□□□ -0.7
VIPAS39-208ENST00000556412 G3V4G9 280 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 ZNF709Q8N972 641 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 MARC2Q969Z3 335 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 PPP1R14BQ96C90 147 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 NARS2Q96I59 477 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 NPCDR1Q9BY65 106 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 MRPL27Q9P0M9 148 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 RABAC1Q9UI14 185 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 SLC45A2Q9UMX9 530 aa10.66□□□□□ -0.7
VIPAS39-208ENST00000556412 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 MPDU1O75352 247 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 EIF2B2P49770 351 aaKnown RBP10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 SMPXQ9UHP9 88 aa10.65□□□□□ -0.7
VIPAS39-208ENST00000556412 HMSDA8MTL9 139 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 CFDP00746 253 aaPredicted RBP10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 C1QBP02746 253 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 OR5G3P0C626 314 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 INSL3P51460 131 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 ZNF266Q14584 549 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 ZFP69Q49AA0 526 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 STPG3Q8N7X2 389 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 NEURL2Q9BR09 285 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 RSG1Q9BU20 258 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 ARL6Q9H0F7 186 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 MLXQ9UH92 298 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.71
VIPAS39-208ENST00000556412 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 CXCL2P19875 107 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 B2MP61769 119 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 OPCMLQ14982 345 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 Q6ZRG5 221 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 HSD17B11Q8NBQ5 300 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
VIPAS39-208ENST00000556412 BORCS7-ASMTA0A0B4J1R7 106 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 CHEK1O14757 476 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 PFDN1O60925 122 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 HYPMO75409 117 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 CRYBB3P26998 211 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 BMI1P35226 326 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 A0A1W2PS18 150 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 COX7A2P2O60397 106 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
VIPAS39-208ENST00000556412 C8orf88P0DMB2 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms