RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 OR52E5Q8NH55 327 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 C8orf46Q8TAG6 207 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 MRAPQ8TCY5 172 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 Q8WTZ3 238 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 ISOC2Q96AB3 205 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 SDSLQ96GA7 329 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 NOL4LQ96MY1 436 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-240ENST00000556339 OR5B12Q96R08 314 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 OR4F4Q96R69 305 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 HSD17B10Q99714 261 aaKnown RBP3.12□□□□□ -1.91
ATXN3-240ENST00000556339 RARRES2Q99969 163 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM147Q9BVK8 224 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-240ENST00000556339 HES4Q9HCC6 221 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 RPRMQ9NS64 109 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 SLC39A9Q9NUM3 307 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 IL36RNQ9UBH0 155 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 HSPB7Q9UBY9 170 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 GAB2Q9UQC2 676 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 SORL1Q92673 2214 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 DSCAML1Q8TD84 2053 aa3.12□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1D-13A0A0B4J2D9 117 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 A0A1W2PPE3 182 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 hADV38S2A0JD32 116 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM30CPA0ZSE6 113 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PPP5D1E7EU14 171 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 F6UZH7 168 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 RBFOX2O43251 390 aaKnown RBP eCLIP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF737O75373 536 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 CST7O76096 145 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PFN1P07737 140 aaKnown RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 P0C879 139 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PGA5P0DJD9 388 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1-13P0DP09 117 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 CD28P10747 220 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 CCL3L1P16619 93 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 FGF7P21781 194 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 BRS3P32247 399 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 KIR2DS2P43631 304 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 VDAC2P45880 294 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 RAB11AP62491 216 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HTD2P86397 168 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 MEF2BQ02080 365 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TNFRSF9Q07011 255 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 SLC38A11Q08AI6 406 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HAGHQ16775 308 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 BSXQ3C1V8 233 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM30BQ3MIR4 351 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 AKIRIN2Q53H80 203 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 C9orf152Q5JTZ5 239 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 SLC16A13Q7RTY0 426 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 LHFPL4Q7Z7J7 247 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM219Q86XT9 240 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM217Q8N7C4 229 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF709Q8N972 641 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 OR5AU1Q8NGC0 362 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 OR10P1Q8NGE3 313 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 OR51H1Q8NH63 302 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM190Q8WZ59 177 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 CORO2AQ92828 525 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TNFRSF14Q92956 283 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 GALMQ96C23 342 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 OR4C12Q96R67 309 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 C20orf24Q9BUV8 137 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 CACNG5Q9UF02 275 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TRAPPC2LQ9UL33 140 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 RBM7Q9Y580 266 aaKnown RBP3.11□□□□□ -1.91
ATXN3-240ENST00000556339 LY96Q9Y6Y9 160 aa3.11□□□□□ -1.91
ATXN3-240ENST00000556339 TRGV10A0A0A0MS01 117 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 CEBPZOSA8MTT3 80 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 C17orf98A8MV24 154 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 H7BYZ3 331 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 SLC33A1O00400 549 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms