RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 PPP1R1CQ8WVI7 109 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 TRGV9Q99603 122 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 PBDC1Q9BVG4 233 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 IGHV3-66A0A0C4DH42 116 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 PET100P0DJ07 73 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 SLC38A11Q08AI6 406 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 TMEM144Q7Z5S9 345 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 STX12Q86Y82 276 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 LILRB2Q8N423 598 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 TMEM217Q8N7C4 229 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 NPVFQ9HCQ7 196 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 OR5AC2Q9NZP5 309 aa15.22■□□□□ 0.03
RCCD1-205ENST00000556333 IGKV1OR2-108A0A075B7D4 117 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 ZNF785A8K8V0 405 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 E5RGE8 158 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 APOHP02749 345 aaPredicted RBP15.21■□□□□ 0.03
RCCD1-205ENST00000556333 HNRNPCP07910 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
RCCD1-205ENST00000556333 CXCL3P19876 107 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 LYZP61626 148 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 ARL16Q0P5N6 197 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 FCN2Q15485 313 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 TMEM252Q8N6L7 170 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 ST8SIA2Q92186 375 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 RNF125Q96EQ8 232 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 RNF2Q99496 336 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 TMEM231Q9H6L2 316 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 RABAC1Q9UI14 185 aa15.21■□□□□ 0.03
RCCD1-205ENST00000556333 IGKV3-7A0A075B6H7 116 aa15.2■□□□□ 0.02
RCCD1-205ENST00000556333 TRAV25A0A0B4J276 109 aa15.2■□□□□ 0.02
RCCD1-205ENST00000556333 A0A1W2PS18 150 aa15.2■□□□□ 0.02
RCCD1-205ENST00000556333 IGSF23A1L1A6 192 aa15.2■□□□□ 0.02
RCCD1-205ENST00000556333 SULT1A1P50225 295 aa15.2■□□□□ 0.02
RCCD1-205ENST00000556333 USF2Q15853 346 aaPredicted RBP15.2■□□□□ 0.02
RCCD1-205ENST00000556333 FNDC10F2Z333 226 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 MPC2O95563 127 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 CRYBB3P26998 211 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 P2RY1P47900 373 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 CD81P60033 236 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 RPL11P62913 178 aaKnown RBP15.19■□□□□ 0.02
RCCD1-205ENST00000556333 HBG1P69891 147 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 HBG2P69892 147 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 TEPPQ6URK8 271 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 BPIFCQ8NFQ6 507 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 OR11H7Q8NGC8 314 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 GRAMD2BQ96HH9 432 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 GGACTQ9BVM4 153 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 SLC25A31Q9H0C2 315 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 SMAD5-AS1Q9Y6J3 95 aa15.19■□□□□ 0.02
RCCD1-205ENST00000556333 H0YIZ8 118 aa15.18■□□□□ 0.02
RCCD1-205ENST00000556333 GATA2P23769 480 aaPredicted RBP15.18■□□□□ 0.02
RCCD1-205ENST00000556333 S100A11P31949 105 aa15.18■□□□□ 0.02
RCCD1-205ENST00000556333 CYP2G1PQ6ZSU1 146 aa15.18■□□□□ 0.02
RCCD1-205ENST00000556333 TCF24Q7RTU0 167 aa15.18■□□□□ 0.02
RCCD1-205ENST00000556333 VSIRQ9H7M9 311 aa15.18■□□□□ 0.02
RCCD1-205ENST00000556333 LSM4Q9Y4Z0 139 aaKnown RBP15.18■□□□□ 0.02
RCCD1-205ENST00000556333 TSPAN4O14817 238 aa15.17■□□□□ 0.02
RCCD1-205ENST00000556333 CD7P09564 240 aa15.17■□□□□ 0.02
RCCD1-205ENST00000556333 PPP1R14BQ96C90 147 aa15.17■□□□□ 0.02
RCCD1-205ENST00000556333 SPAG8Q99932 426 aaPredicted RBP15.17■□□□□ 0.02
RCCD1-205ENST00000556333 NEURL2Q9BR09 285 aa15.17■□□□□ 0.02
RCCD1-205ENST00000556333 DFFBO76075 338 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 CFDP00746 253 aaPredicted RBP15.16■□□□□ 0.02
RCCD1-205ENST00000556333 CD5P06127 495 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 TFPI2P48307 235 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
RCCD1-205ENST00000556333 EWSR1Q01844 656 aaKnown RBP eCLIP15.16■□□□□ 0.02
RCCD1-205ENST00000556333 NHLH2Q02577 135 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 GBGT1Q8N5D6 347 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 THAP6Q8TBB0 222 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 UQCC1Q9NVA1 299 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 MBD2Q9UBB5 411 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 PFDN2Q9UHV9 154 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 DNAH3Q8TD57 4116 aa15.16■□□□□ 0.02
RCCD1-205ENST00000556333 UBE2L5PA0A1B0GUS4 154 aa15.15■□□□□ 0.02
RCCD1-205ENST00000556333 PAFAH1B2P68402 229 aa15.15■□□□□ 0.02
RCCD1-205ENST00000556333 TMEM182Q6ZP80 229 aaPredicted RBP15.15■□□□□ 0.02
RCCD1-205ENST00000556333 Q8N1Y9 231 aa15.15■□□□□ 0.02
RCCD1-205ENST00000556333 RNF126Q9BV68 326 aa15.15■□□□□ 0.02
RCCD1-205ENST00000556333 TMEM147Q9BVK8 224 aa15.15■□□□□ 0.02
RCCD1-205ENST00000556333 OR4C46A6NHA9 309 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 DNASE2O00115 360 aaPredicted RBP15.14■□□□□ 0.01
RCCD1-205ENST00000556333 ORM2P19652 201 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 SELENOTP62341 195 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 BAXQ07812 192 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 ATP6V1FQ16864 119 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 WFDC3Q8IUB2 231 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 OR1B1Q8NGR6 318 aa15.14■□□□□ 0.01
RCCD1-205ENST00000556333 AGPAT2O15120 278 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 LINC00869P0C866 280 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 NUP62P37198 522 aaPredicted RBP15.13■□□□□ 0.01
RCCD1-205ENST00000556333 RAB31Q13636 194 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 FAM90A2PQ658T7 463 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 OR5C1Q8NGR4 320 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 TUBA4BQ9H853 241 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 DOK5Q9P104 306 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 UBQLN2Q9UHD9 624 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 U3KQE9 123 aa15.13■□□□□ 0.01
RCCD1-205ENST00000556333 OR11H12B2RN74 326 aa15.12■□□□□ 0.01
RCCD1-205ENST00000556333 GIPP09681 153 aaPredicted RBP15.12■□□□□ 0.01
RCCD1-205ENST00000556333 IGHV4-30-4P0DP06 118 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms