RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 WWC2-AS2Q96NR7 200 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 CITED4Q96RK1 184 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 RAB40CQ96S21 281 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
ACTN1-217ENST00000556203 U3KQE9 123 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-217ENST00000556203 FABP1P07148 127 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 PAX9P55771 341 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 DEFA1P59665 94 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 DEFA3P59666 94 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 ACOT7LQ6ZUV0 252 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 RNF125Q96EQ8 232 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 TRGV9Q99603 122 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 MS4A6AQ9H2W1 248 aa11.3□□□□□ -0.6
ACTN1-217ENST00000556203 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-217ENST00000556203 AKR1C1Q04828 323 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 OR2F1Q13607 317 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 FAM110AQ9BQ89 295 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 PBDC1Q9BVG4 233 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 GPN1Q9HCN4 374 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-217ENST00000556203 RETNQ9HD89 108 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 RABAC1Q9UI14 185 aa11.29□□□□□ -0.6
ACTN1-217ENST00000556203 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 SNRPGP15A8MWD9 76 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 TSC22D2O75157 780 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 CCNKO75909 580 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-217ENST00000556203 TAS2R30P59541 319 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 LYZP61626 148 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
ACTN1-217ENST00000556203 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
ACTN1-217ENST00000556203 TRAV2A0A0B4J234 112 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 C7orf66A4D0T2 115 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 INMT-MINDY4F8WBC2 141 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 K7EPK0 472 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 L7N2F9 121 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 RRAS2P62070 204 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-217ENST00000556203 VAMP2P63027 116 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 OR10P1Q8NGE3 313 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.61
ACTN1-217ENST00000556203 HELTA6NFD8 242 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 BUB3O43684 328 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 PRAF2O60831 178 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 EIF2B2P49770 351 aaKnown RBP11.26□□□□□ -0.61
ACTN1-217ENST00000556203 ZNF124Q15973 351 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 TMEM144Q7Z5S9 345 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 FAM24BQ8N5W8 94 aa11.26□□□□□ -0.61
ACTN1-217ENST00000556203 K7EQG2 157 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
ACTN1-217ENST00000556203 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-217ENST00000556203 BCAP31P51572 246 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 DEFB131AP59861 70 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 S100A10P60903 97 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 DLK1P80370 383 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 PFDN2Q9UHV9 154 aa11.25□□□□□ -0.61
ACTN1-217ENST00000556203 GOSR2O14653 212 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 CFDP00746 253 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-217ENST00000556203 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-217ENST00000556203 CAV2P51636 162 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 AP2S1P53680 142 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-217ENST00000556203 APOC4P55056 127 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 IL15RAQ13261 267 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 TMEM182Q6ZP80 229 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-217ENST00000556203 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 PPP1R14BQ96C90 147 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 COL7A1Q02388 2944 aa11.24□□□□□ -0.61
ACTN1-217ENST00000556203 PVALBP20472 110 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-217ENST00000556203 RAB32Q13637 225 aa11.23□□□□□ -0.61
ACTN1-217ENST00000556203 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
ACTN1-217ENST00000556203 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
ACTN1-217ENST00000556203 BPIFCQ8NFQ6 507 aa11.23□□□□□ -0.61
ACTN1-217ENST00000556203 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
ACTN1-217ENST00000556203 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 SIX6O95475 246 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 ZNF688P0C7X2 276 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 ORM2P19652 201 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 NPVFQ9HCQ7 196 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
ACTN1-217ENST00000556203 KIR2DL5BA0A0G2JN68 375 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms