RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FAM201AQ5SY85 155 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 SLC17A3O00476 420 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 FBLN7Q53RD9 439 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 LY6G6FQ5SQ64 297 aa8.83□□□□□ -1
ACTN1-216ENST00000556083 C11orf68Q9H3H3 251 aaKnown RBP8.83□□□□□ -1
ACTN1-216ENST00000556083 RNASE1P07998 156 aaKnown RBP8.83□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-11P01762 117 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 GAS1P54826 345 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 C15orf32Q32M92 178 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 Q5BKY6 102 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 TMEM200BQ69YZ2 307 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 IGHV3OR16-13A0A075B7E8 117 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-74A0A0B4J1X5 117 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
ACTN1-216ENST00000556083 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 C18orf15Q96N68 181 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 PSME4Q14997 1843 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 OTOFQ9HC10 1997 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 BUB1B-PAK6H3BSN5 160 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 TCRAP04437 139 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 DMRTA2Q96SC8 542 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 NDUFAF3Q9BU61 184 aa8.82□□□□□ -1
ACTN1-216ENST00000556083 H0YJW9 148 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-48P01763 117 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 YPEL3P61236 119 aaPredicted RBP8.81□□□□□ -1
ACTN1-216ENST00000556083 RPRMLQ8N4K4 120 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 DERL1Q9BUN8 251 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 CLDN16Q9Y5I7 305 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 A0A0G2JMZ2 1700 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 LRRC37A2A6NM11 1700 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
ACTN1-216ENST00000556083 BTCP35070 178 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 UBE2E1P51965 193 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 CTAG1AP78358 180 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 ZNF585BQ52M93 769 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 RCHY1Q96PM5 261 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 DAZ1Q9NQZ3 744 aaKnown RBP8.81□□□□□ -1
ACTN1-216ENST00000556083 EGR1P18146 543 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 CKS1BP61024 79 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 ZNF562Q6V9R5 426 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 SIGLEC9Q9Y336 463 aa8.81□□□□□ -1
ACTN1-216ENST00000556083 LMO1P25800 156 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 LINC00311Q8N616 119 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 HEATR5BQ9P2D3 2071 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-23P01764 117 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 PAX2Q02962 417 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-49A0A0A0MS15 119 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 SERF1AO75920 110 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 PSG1P11464 419 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 PCP4P48539 62 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 TEX43Q6ZNM6 134 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 NEGR1Q7Z3B1 354 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 OCC1Q8TAD7 63 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 BEX4Q9NWD9 120 aaPredicted RBP8.8□□□□□ -1
ACTN1-216ENST00000556083 C1QTNF9P0C862 333 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 LYL1P12980 280 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 CFHR2P36980 270 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 FAM110DQ8TAY7 271 aaPredicted RBP8.8□□□□□ -1
ACTN1-216ENST00000556083 PTPRFP10586 1907 aa8.8□□□□□ -1
ACTN1-216ENST00000556083 IGKV1-12A0A0C4DH73 117 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 K7ENP7 123 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 IGKV1D-12P01611 117 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 ZNF474Q6S9Z5 364 aaPredicted RBP8.79□□□□□ -1
ACTN1-216ENST00000556083 H3BUA1 57 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 GAFA1Q96PS6 74 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 ZNF492Q9P255 531 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 ERG28Q9UKR5 140 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 ZDBF2Q9HCK1 2354 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 PINLYPA6NC86 204 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 A8MWV9 139 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 RAMP3O60896 148 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 PSG3Q16557 428 aa8.79□□□□□ -1
ACTN1-216ENST00000556083 TRPM7Q96QT4 1865 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 SAP30O75446 220 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 LGALS1P09382 135 aaKnown RBP8.78□□□□□ -1
ACTN1-216ENST00000556083 LCN12Q6JVE5 192 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 Q6P435 159 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
ACTN1-216ENST00000556083 PNRC2Q9NPJ4 139 aaKnown RBP8.78□□□□□ -1
ACTN1-216ENST00000556083 B3GALT5-AS1P59052 145 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 ZNF319Q9P2F9 582 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 COL4A1P02462 1669 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 M0R2P5 195 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 EFNA2O43921 213 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 GZMBP10144 247 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 MST1P26927 711 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 RMI2Q96E14 147 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 JPT2Q9H910 190 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 A0A0G2JNJ9 132 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 H0YIZ8 118 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 CD55P08174 381 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 HTN3P15516 51 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms