RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 STXBP6Q8NFX7 210 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 OR52E5Q8NH55 327 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 DTD1Q8TEA8 209 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 TXN2Q99757 166 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 MS4A6AQ9H2W1 248 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 VSIRQ9H7M9 311 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 SHPKQ9UHJ6 478 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 RABAC1Q9UI14 185 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 PAIP2BQ9ULR5 123 aaKnown RBP4.69□□□□□ -1.66
TMEM260-209ENST00000556079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-209ENST00000556079 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 DNAH11Q96DT5 4516 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 IGKV1OR2-108A0A075B7D4 117 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 C9orf170A2RU37 121 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 OR4C46A6NHA9 309 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 WRBO00258 174 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 RGS13O14921 159 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 IL4P05112 153 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 GIG44P09565 113 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-209ENST00000556079 ZNF688P0C7X2 276 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 IL7P13232 177 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 C4BPBP20851 252 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-209ENST00000556079 HTR2BP41595 481 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 P2RY1P47900 373 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
TMEM260-209ENST00000556079 GAMTQ14353 236 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 TRIQKQ629K1 86 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 CENPSQ8N2Z9 138 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 OR51G1Q8NGK1 321 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 IL22RA2Q969J5 263 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 SEC22CQ9BRL7 303 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 RABL2AQ9UBK7 228 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-209ENST00000556079 RABL2BQ9UNT1 228 aa4.68□□□□□ -1.66
TMEM260-209ENST00000556079 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 K7EQG2 157 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 ZNF701M0R085 212 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-209ENST00000556079 B3GALNT1O75752 331 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 JTBO76095 146 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 NDUFB6O95139 128 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 IFNA4P05014 189 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 PSG1P11464 419 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 CRYBB3P26998 211 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 FAUP35544 74 aaKnown RBP4.67□□□□□ -1.66
TMEM260-209ENST00000556079 SUB1P53999 127 aaKnown RBP eCLIP4.67□□□□□ -1.66
TMEM260-209ENST00000556079 POLR2GP62487 172 aaKnown RBP eCLIP4.67□□□□□ -1.66
TMEM260-209ENST00000556079 DHRS2Q13268 280 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 TMEM128Q5BJH2 165 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 SPANXN2Q5MJ10 180 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 LAMTOR1Q6IAA8 161 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 LYG2Q86SG7 212 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 OR1S2Q8NGQ3 325 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 GLMPQ8WWB7 406 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 ATP6V0BQ99437 205 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 PBDC1Q9BVG4 233 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 CLEC5AQ9NY25 188 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 KCNIP3Q9Y2W7 256 aa4.67□□□□□ -1.66
TMEM260-209ENST00000556079 TRAV6A0A075B6T7 132 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 H3BS24 57 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 DNASE2O00115 360 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-209ENST00000556079 CORTO00230 105 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 SPRY2O43597 315 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 SSSCA1O60232 199 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 HNRNPCP07910 306 aaKnown RBP eCLIP4.66□□□□□ -1.66
TMEM260-209ENST00000556079 OR4E1P0C645 316 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 ANXA3P12429 323 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 NPPCP23582 126 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 INPP1P49441 399 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 PAX9P55771 341 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 FXYD7P58549 80 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 AP3S2P59780 193 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 LYZP61626 148 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 ARL16Q0P5N6 197 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 CNPY1Q3B7I2 92 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 GDF5OSQ5U4N7 250 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 IGFL4Q6B9Z1 124 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 C16orf54Q6UWD8 224 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 LRTM2Q8N967 370 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 IL17DQ8TAD2 202 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 RNASEH2CQ8TDP1 164 aaKnown RBP4.66□□□□□ -1.66
TMEM260-209ENST00000556079 DCANP1Q8TF63 244 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 RNF183Q96D59 192 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 C17orf77Q96MU5 243 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 SCGB3A2Q96PL1 93 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 METTL26Q96S19 204 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 GINS3Q9BRX5 216 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
TMEM260-209ENST00000556079 DOK5Q9P104 306 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 TBC1D24Q9ULP9 559 aa4.66□□□□□ -1.66
TMEM260-209ENST00000556079 RPS10-NUDT3A0A1W2PQS6 291 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 ZFP92A6NM28 416 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 F6UB75 175 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SYNGR2O43760 224 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 TOMM40O96008 361 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 CA1P00915 261 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 IGKV3-20P01619 116 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 RD3LP0DJH9 198 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms