RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 MRPL36Q9P0J6 103 aaKnown RBP12.9□□□□□ -0.34
NPC2-208ENST00000556009 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 A0A0B4J2A0 478 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 PIGBOS1A0A0B4J2F0 54 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 PRAF2O60831 178 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
NPC2-208ENST00000556009 OXA1LQ15070 435 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 MLANAQ16655 118 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
NPC2-208ENST00000556009 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
NPC2-208ENST00000556009 METTL26Q96S19 204 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
NPC2-208ENST00000556009 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 SHPKQ9UHJ6 478 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
NPC2-208ENST00000556009 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 C11orf94C9JXX5 98 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 DEFB4AO15263 64 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 SPP1P10451 314 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
NPC2-208ENST00000556009 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 Q8NAQ8 132 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
NPC2-208ENST00000556009 HECTD4Q9Y4D8 3996 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 IGKV1-17P01599 117 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 HOXB5P09067 269 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 OPRK1P41145 380 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 P2RY1P47900 373 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 SPCS3P61009 180 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 Q6ZRM9 215 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
NPC2-208ENST00000556009 NARS2Q96I59 477 aaKnown RBP12.87□□□□□ -0.35
NPC2-208ENST00000556009 U3KQE9 123 aa12.87□□□□□ -0.35
NPC2-208ENST00000556009 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
NPC2-208ENST00000556009 SNRPGP15A8MWD9 76 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 ADAP1O75689 374 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
NPC2-208ENST00000556009 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 MIFP14174 115 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 HTR2BP41595 481 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 PRR20EP86478 221 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 PRR20CP86479 221 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 PRR20DP86480 221 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 PRR20BP86481 221 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 PRR20AP86496 221 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
NPC2-208ENST00000556009 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 GGNBP1Q5YKI7 109 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.86□□□□□ -0.35
NPC2-208ENST00000556009 CACNG5Q9UF02 275 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
NPC2-208ENST00000556009 RPS10-NUDT3A0A1W2PQS6 291 aa12.85□□□□□ -0.35
NPC2-208ENST00000556009 IGHV4-28A0A0C4DH34 117 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 HELTA6NFD8 242 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 IFNA21P01568 189 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 ZNF688P0C7X2 276 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 EIF2B2P49770 351 aaKnown RBP12.84□□□□□ -0.35
NPC2-208ENST00000556009 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
NPC2-208ENST00000556009 YPEL3P61236 119 aaPredicted RBP12.84□□□□□ -0.35
NPC2-208ENST00000556009 TIGITQ495A1 244 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 C2orf83Q53S99 150 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 Q8WTZ3 238 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
NPC2-208ENST00000556009 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 IGLL5B9A064 214 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 SLC25A4P12235 298 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 PRSS54Q6PEW0 395 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 C16orf54Q6UWD8 224 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 OR1S2Q8NGQ3 325 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 RNASEH2CQ8TDP1 164 aaKnown RBP12.83□□□□□ -0.36
NPC2-208ENST00000556009 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
NPC2-208ENST00000556009 X6R8D5 127 aa12.83□□□□□ -0.36
NPC2-208ENST00000556009 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 CCSO14618 274 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 SLC25A6P12236 298 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 C4BPBP20851 252 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 ACTL10Q5JWF8 245 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 RAB40CQ96S21 281 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 HEYLQ9NQ87 328 aaPredicted RBP12.82□□□□□ -0.36
NPC2-208ENST00000556009 CACFD1Q9UGQ2 172 aa12.82□□□□□ -0.36
NPC2-208ENST00000556009 KIAA1109Q2LD37 5005 aa12.81□□□□□ -0.36
NPC2-208ENST00000556009 SSNA1O43805 119 aa12.81□□□□□ -0.36
NPC2-208ENST00000556009 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
NPC2-208ENST00000556009 OR10J1P30954 320 aa12.81□□□□□ -0.36
NPC2-208ENST00000556009 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
NPC2-208ENST00000556009 DNAH17Q9UFH2 4485 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms