RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CFAP47Q6ZTR5 3102 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 IGKV1D-37A0A075B6S9 117 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 TRAV34A0A0B4J273 112 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 IGHV1-69-2A0A0G2JMI3 117 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 A0A1W2PS18 150 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 HYPMO75409 117 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 MOSP00540 346 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 PLAUP00749 431 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 CA1P00915 261 aaPredicted RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 CA7P43166 264 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 UCNP55089 124 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 DLX6P56179 175 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 HCP5Q6MZN7 132 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 C19orf35Q6ZS72 473 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 ATP5L2Q7Z4Y8 100 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 DMRTC2Q8IXT2 367 aaPredicted RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 TSKUQ8WUA8 353 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 NUDT11Q96G61 164 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 FMC1Q96HJ9 113 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 JKAMPQ9P055 326 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 MRPL27Q9P0M9 148 aaKnown RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 CTSZQ9UBR2 303 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 FBXL7Q9UJT9 491 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 EPDR1Q9UM22 224 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 PIEZO2Q9H5I5 2752 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 ARFGEF3Q5TH69 2177 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 AKAP13Q12802 2813 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 K7ENP7 123 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 TNFRSF13BO14836 293 aaPredicted RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 FCN3O75636 299 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 RPLP1P05386 114 aaKnown RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 CRYGCP07315 174 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 NBEAP1P0C6P0 100 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 NTF3P20783 257 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 COMPP49747 757 aaPredicted RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 TDGF1P3P51864 188 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 CASP6P55212 293 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 RBPJQ06330 500 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 C5orf17Q8NAS9 161 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 TMEM116Q8NCL8 245 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 MBD6Q96DN6 1003 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 GPR82Q96P67 336 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 RCHY1Q96PM5 261 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 ATG101Q9BSB4 218 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 RALYQ9UKM9 306 aaKnown RBP5.62□□□□□ -1.51
TDP1-213ENST00000555880 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 INSIG2Q9Y5U4 225 aa5.62□□□□□ -1.51
TDP1-213ENST00000555880 IGHV2-26A0A0B4J1V2 119 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 IGHV3-72A0A0B4J1Y9 119 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 PGPA6NDG6 321 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 B9A039 149 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 C22orf46C9J442 243 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 PLXNB1O43157 2135 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 HSBP1O75506 76 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 FSTL3O95633 263 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 MYCNOSP40205 109 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 GNG5P63218 68 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 SLAQ13239 276 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 TDRG1Q3Y452 100 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 FAM162BQ5T6X4 162 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 KLHDC1Q8N7A1 406 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 TMEM190Q8WZ59 177 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 FAM168AQ92567 244 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 DAZAP1Q96EP5 407 aaKnown RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 RBM14Q96PK6 669 aaKnown RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 NEU1Q99519 415 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 CLEC7AQ9BXN2 247 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 RPP21Q9H633 154 aaKnown RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 HIGD1AQ9Y241 93 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 KLF12Q9Y4X4 402 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 SOX21Q9Y651 276 aaPredicted RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 MGAQ8IWI9 3026 aa5.61□□□□□ -1.51
TDP1-213ENST00000555880 PTPRZ1P23471 2315 aaPredicted RBP5.61□□□□□ -1.51
TDP1-213ENST00000555880 MALRD1Q5VYJ5 2156 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 ASPMQ8IZT6 3477 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 A8MWL6 223 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 SHISA9B4DS77 424 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 TOMM40O96008 361 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 P01737 135 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 CD3EP07766 207 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 FOSL1P15407 271 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 APOBEC3AP31941 199 aaPredicted RBP5.6□□□□□ -1.51
TDP1-213ENST00000555880 CAMPP49913 170 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 HBBP68871 147 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 KLF5Q13887 457 aaPredicted RBP5.6□□□□□ -1.51
TDP1-213ENST00000555880 PLGLAQ15195 96 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 SPATA45Q537H7 98 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 CT83Q5H943 113 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 PVRIGQ6DKI7 326 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 C8orf46Q8TAG6 207 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 RPEQ96AT9 228 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 RITA1Q96K30 269 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 SIGLEC9Q9Y336 463 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 F11RQ9Y624 299 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms