RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PPP5D1E7EU14 171 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 LINC01619G3V211 115 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 TEX46H3BTG2 121 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 M0QZ24 198 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 NDUFA4O00483 81 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 PF4P02776 101 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 IL4P05112 153 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 RAB5CP51148 216 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 MLANAQ16655 118 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 OR4F17Q8NGA8 305 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 OR4F4Q96R69 305 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 METTL26Q96S19 204 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 CITED2Q99967 270 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-220ENST00000555634 RSG1Q9BU20 258 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 PBDC1Q9BVG4 233 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 WFDC1Q9HC57 220 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 SLC39A9Q9NUM3 307 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
SHMT2-220ENST00000555634 A0A1W2PPV4 95 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 HYPMO75409 117 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 OR5G3P0C626 314 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 SPP1P10451 314 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 RAB2AP61019 212 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 RHOBP62745 196 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 TMEM182Q6ZP80 229 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-220ENST00000555634 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 OR1B1Q8NGR6 318 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 LRRC20Q8TCA0 184 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-220ENST00000555634 TMED6Q8WW62 240 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 GRAMD2BQ96HH9 432 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 C20orf24Q9BUV8 137 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 TMEM231Q9H6L2 316 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 CYTL1Q9NRR1 136 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 RABAC1Q9UI14 185 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 PUS1Q9Y606 427 aaKnown RBP eCLIP8.66□□□□□ -1.02
SHMT2-220ENST00000555634 JMJD1CQ15652 2540 aa8.66□□□□□ -1.02
SHMT2-220ENST00000555634 IGKV1OR2-108A0A075B7D4 117 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 ZNF320A2RRD8 509 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 OR2C1O95371 312 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 IGKV1-17P01599 117 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 CTSGP08311 255 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 PSG1P11464 419 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 ORM2P19652 201 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 M6PRP20645 277 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 TAS2R45P59539 299 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 ZNF90Q03938 601 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 MIC13Q5XKP0 118 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 C1QL4Q86Z23 238 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 GATAD1Q8WUU5 269 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 MRPL32Q9BYC8 188 aaKnown RBP8.65□□□□□ -1.02
SHMT2-220ENST00000555634 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 ARV1Q9H2C2 271 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
SHMT2-220ENST00000555634 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
SHMT2-220ENST00000555634 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 SLC45A2Q9UMX9 530 aa8.65□□□□□ -1.02
SHMT2-220ENST00000555634 IGKV1D-37A0A075B6S9 117 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 A0A087WW49 117 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 A0A1W2PS18 150 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-220ENST00000555634 I3L521 148 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-220ENST00000555634 RAB14P61106 215 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 PRR20EP86478 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 PRR20CP86479 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 PRR20DP86480 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 PRR20BP86481 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 PRR20AP86496 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 KHDC3LQ587J8 217 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 OR10G4Q8NGN3 311 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 OR10G9Q8NGN4 311 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 OR10G7Q8NGN6 311 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 CHRDL1Q9BU40 450 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 DOK5Q9P104 306 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 BOLA1Q9Y3E2 137 aa8.64□□□□□ -1.03
SHMT2-220ENST00000555634 IGHV3-35A0A0C4DH35 117 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 CCL24O00175 119 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 ADMP35318 185 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 CDC34P49427 236 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-220ENST00000555634 KIAA0141Q14154 515 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-220ENST00000555634 DEFB136Q30KP8 78 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 TEX261Q6UWH6 196 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms