RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 EXTL2Q9UBQ6 330 aa9.44□□□□□ -0.9
TUBB3-208ENST00000555576 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
TUBB3-208ENST00000555576 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
TUBB3-208ENST00000555576 CRYM-AS1A6NIL9 109 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
TUBB3-208ENST00000555576 TNFAIP8O95379 198 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 RAB3DO95716 219 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 SPART-AS1P0CW21 52 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 RD3LP0DJH9 198 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 NPY1RP25929 384 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 MEF2DQ14814 521 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 CTF1Q16619 201 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 NAA50Q9GZZ1 169 aaKnown RBP9.43□□□□□ -0.9
TUBB3-208ENST00000555576 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
TUBB3-208ENST00000555576 TMEM56-RWDD3S4R434 201 aa9.43□□□□□ -0.9
TUBB3-208ENST00000555576 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 GABARAPO95166 117 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
TUBB3-208ENST00000555576 ZNF79Q15937 498 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 GPR107Q5VW38 600 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 TMEM268Q5VZI3 342 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 ETFRF1Q6IPR1 90 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 MZT2AQ6P582 158 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 FOXI2Q6ZQN5 318 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 AP3S1Q92572 193 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
TUBB3-208ENST00000555576 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 CEBPZOSA8MTT3 80 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 GABARAPH6UMI1 98 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 EMP1P54849 157 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 FXYD7P58549 80 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 SSBP1Q04837 148 aaKnown RBP9.41□□□□□ -0.9
TUBB3-208ENST00000555576 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 OR8G2PQ6IF36 304 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 HSPB7Q9UBY9 170 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 GPR132Q9UNW8 380 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 C14orf166Q9Y224 244 aaKnown RBP9.41□□□□□ -0.9
TUBB3-208ENST00000555576 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
TUBB3-208ENST00000555576 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 ZNF182P17025 639 aaPredicted RBP9.4□□□□□ -0.9
TUBB3-208ENST00000555576 PSMB3P49720 205 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 PAX9P55771 341 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 ZNF90Q03938 601 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 OXA1LQ15070 435 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 GSG1LQ6UXU4 331 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 IL22RA2Q969J5 263 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
TUBB3-208ENST00000555576 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 TEX48A0A1B0GUV7 120 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 A8MTW9 85 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 IFNA10P01566 189 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 SULT1A3P0DMM9 295 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 SULT1A4P0DMN0 295 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
TUBB3-208ENST00000555576 RNF212Q495C1 297 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 OR4C16Q8NGL9 310 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 C15orf40Q8WUR7 153 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 SMIM4Q8WVI0 70 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 C17orf77Q96MU5 243 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 U3KQ87 197 aa9.39□□□□□ -0.91
TUBB3-208ENST00000555576 F6UB75 175 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 SMIM18P0DKX4 95 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
TUBB3-208ENST00000555576 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
TUBB3-208ENST00000555576 GAMTQ14353 236 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 NOXA1Q86UR1 476 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 DTD1Q8TEA8 209 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 CACFD1Q9UGQ2 172 aa9.38□□□□□ -0.91
TUBB3-208ENST00000555576 YTHDF2Q9Y5A9 579 aaKnown RBP9.38□□□□□ -0.91
TUBB3-208ENST00000555576 IGKV1OR2-108A0A075B7D4 117 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 A0A0J9YX75 114 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 ISLRO14498 428 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 IFNA21P01568 189 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
TUBB3-208ENST00000555576 PSG9Q00887 426 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 FAM78BQ5VT40 261 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
TUBB3-208ENST00000555576 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms