RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RNF125Q96EQ8 232 aa17.92■□□□□ 0.46
PRKCH-216ENST00000555542 SRRQ9GZT4 340 aa17.92■□□□□ 0.46
PRKCH-216ENST00000555542 KNCNA6PVL3 124 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 PITX3O75364 302 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 HOXB5P09067 269 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 SLC25A6P12236 298 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 GAMTQ14353 236 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 PSMG4Q5JS54 123 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 ACTL10Q5JWF8 245 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 CEMP1Q6PRD7 247 aaPredicted RBP17.91■□□□□ 0.46
PRKCH-216ENST00000555542 SIGLEC15Q6ZMC9 328 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 PFDN2Q9UHV9 154 aa17.91■□□□□ 0.46
PRKCH-216ENST00000555542 KLK5Q9Y337 293 aaPredicted RBP17.91■□□□□ 0.46
PRKCH-216ENST00000555542 FAM90A26D6RGX4 464 aa17.9■□□□□ 0.46
PRKCH-216ENST00000555542 FABP1P07148 127 aa17.9■□□□□ 0.46
PRKCH-216ENST00000555542 NUP62P37198 522 aaPredicted RBP17.9■□□□□ 0.46
PRKCH-216ENST00000555542 RPP30P78346 268 aaKnown RBP17.9■□□□□ 0.46
PRKCH-216ENST00000555542 CIB3Q96Q77 187 aaPredicted RBP17.9■□□□□ 0.46
PRKCH-216ENST00000555542 BUB3O43684 328 aa17.89■□□□□ 0.45
PRKCH-216ENST00000555542 SPP1P10451 314 aa17.89■□□□□ 0.45
PRKCH-216ENST00000555542 SNRPD3P62318 126 aaKnown RBP17.89■□□□□ 0.45
PRKCH-216ENST00000555542 MORN3Q6PF18 240 aaPredicted RBP17.89■□□□□ 0.45
PRKCH-216ENST00000555542 TRPT1Q86TN4 253 aaKnown RBP17.89■□□□□ 0.45
PRKCH-216ENST00000555542 MAGT1Q9H0U3 335 aa17.89■□□□□ 0.45
PRKCH-216ENST00000555542 NRN1Q9NPD7 142 aa17.89■□□□□ 0.45
PRKCH-216ENST00000555542 LINC00854A0A1B0GVQ3 168 aa17.88■□□□□ 0.45
PRKCH-216ENST00000555542 NAP1L6A6NFF2 107 aa17.88■□□□□ 0.45
PRKCH-216ENST00000555542 ZNF90Q03938 601 aa17.88■□□□□ 0.45
PRKCH-216ENST00000555542 TMEM41BQ5BJD5 291 aa17.88■□□□□ 0.45
PRKCH-216ENST00000555542 WRBO00258 174 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 SYNGR2O43760 224 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 LY6G6CO95867 125 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 UBE2MP61081 183 aaKnown RBP17.87■□□□□ 0.45
PRKCH-216ENST00000555542 LYZP61626 148 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 BAK1Q16611 211 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 GGNBP1Q5YKI7 109 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 C11orf45Q8TAV5 145 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 PPP1R14BQ96C90 147 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 C11orf68Q9H3H3 251 aaKnown RBP17.87■□□□□ 0.45
PRKCH-216ENST00000555542 FBXL17Q9UF56 701 aa17.87■□□□□ 0.45
PRKCH-216ENST00000555542 DEFB4AO15263 64 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 OR2F1Q13607 317 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 OR8G2PQ6IF36 304 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 PHLDA1Q8WV24 401 aaPredicted RBP17.86■□□□□ 0.45
PRKCH-216ENST00000555542 LINC00476Q8WZB0 136 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 MFFQ9GZY8 342 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 AGRNO00468 2067 aa17.86■□□□□ 0.45
PRKCH-216ENST00000555542 IGKV1D-37A0A075B6S9 117 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 CENPXA8MT69 81 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 SNRPGP15A8MWD9 76 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 NDUFB6O95139 128 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 COQ8AQ8NI60 647 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 RAB40CQ96S21 281 aa17.85■□□□□ 0.45
PRKCH-216ENST00000555542 C9orf170A2RU37 121 aa17.84■□□□□ 0.45
PRKCH-216ENST00000555542 NANOS2P60321 138 aaKnown RBP17.84■□□□□ 0.45
PRKCH-216ENST00000555542 SPANXN5Q5MJ07 72 aa17.84■□□□□ 0.45
PRKCH-216ENST00000555542 C4BPBP20851 252 aa17.83■□□□□ 0.44
PRKCH-216ENST00000555542 TRGV9Q99603 122 aa17.83■□□□□ 0.44
PRKCH-216ENST00000555542 FLVCR2Q9UPI3 526 aa17.83■□□□□ 0.44
PRKCH-216ENST00000555542 H3BP45 60 aa17.82■□□□□ 0.44
PRKCH-216ENST00000555542 ADAP1O75689 374 aa17.82■□□□□ 0.44
PRKCH-216ENST00000555542 IFNA21P01568 189 aa17.82■□□□□ 0.44
PRKCH-216ENST00000555542 C4orf46Q504U0 113 aa17.82■□□□□ 0.44
PRKCH-216ENST00000555542 SEPSECSQ9HD40 501 aaKnown RBP17.82■□□□□ 0.44
PRKCH-216ENST00000555542 CLEC5AQ9NY25 188 aa17.82■□□□□ 0.44
PRKCH-216ENST00000555542 STRAPQ9Y3F4 350 aaKnown RBP17.82■□□□□ 0.44
PRKCH-216ENST00000555542 GIG44P09565 113 aaPredicted RBP17.81■□□□□ 0.44
PRKCH-216ENST00000555542 NUTF2P61970 127 aaKnown RBP17.81■□□□□ 0.44
PRKCH-216ENST00000555542 AKR1C1Q04828 323 aa17.81■□□□□ 0.44
PRKCH-216ENST00000555542 DNAH1Q9P2D7 4330 aa17.81■□□□□ 0.44
PRKCH-216ENST00000555542 HYDINQ4G0P3 5121 aa17.81■□□□□ 0.44
PRKCH-216ENST00000555542 OR4E1P0C645 316 aa17.8■□□□□ 0.44
PRKCH-216ENST00000555542 THAP8Q8NA92 274 aa17.8■□□□□ 0.44
PRKCH-216ENST00000555542 LINC00052Q96N35 136 aa17.8■□□□□ 0.44
PRKCH-216ENST00000555542 MIFP14174 115 aa17.79■□□□□ 0.44
PRKCH-216ENST00000555542 ANXA7P20073 488 aaKnown RBP17.79■□□□□ 0.44
PRKCH-216ENST00000555542 ID1P41134 155 aa17.79■□□□□ 0.44
PRKCH-216ENST00000555542 C1orf194Q5T5A4 169 aa17.79■□□□□ 0.44
PRKCH-216ENST00000555542 OR8I2Q8N0Y5 310 aa17.79■□□□□ 0.44
PRKCH-216ENST00000555542 Q8NAQ8 132 aa17.79■□□□□ 0.44
PRKCH-216ENST00000555542 C7orf50Q9BRJ6 194 aaKnown RBP17.79■□□□□ 0.44
PRKCH-216ENST00000555542 ALMS1Q8TCU4 4167 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 IGKV1OR2-108A0A075B7D4 117 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 IGHV4-28A0A0C4DH34 117 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 SMCO3A2RU48 225 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 CFDP00746 253 aaPredicted RBP17.78■□□□□ 0.44
PRKCH-216ENST00000555542 IL7P13232 177 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 NKX2-1P43699 371 aaPredicted RBP17.78■□□□□ 0.44
PRKCH-216ENST00000555542 POLR2GP62487 172 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRKCH-216ENST00000555542 SDHCQ99643 169 aaPredicted RBP17.78■□□□□ 0.44
PRKCH-216ENST00000555542 C1QTNF4Q9BXJ3 329 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 TBC1D24Q9ULP9 559 aa17.78■□□□□ 0.44
PRKCH-216ENST00000555542 SSSCA1O60232 199 aa17.77■□□□□ 0.44
PRKCH-216ENST00000555542 BPIFCQ8NFQ6 507 aa17.77■□□□□ 0.44
PRKCH-216ENST00000555542 PSENENQ9NZ42 101 aa17.77■□□□□ 0.44
PRKCH-216ENST00000555542 PRSS46E5RG02 174 aa17.76■□□□□ 0.43
PRKCH-216ENST00000555542 H3BMM0 161 aa17.76■□□□□ 0.43
PRKCH-216ENST00000555542 SCGB1D2O95969 90 aa17.76■□□□□ 0.43
PRKCH-216ENST00000555542 ID3Q02535 119 aa17.76■□□□□ 0.43
PRKCH-216ENST00000555542 ACOT7LQ6ZUV0 252 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms