RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 OR10J1P30954 320 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 CBX5P45973 191 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 RND2P52198 227 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 BSXQ3C1V8 233 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 RNASE12Q5GAN4 147 aaKnown RBP6.63□□□□□ -1.35
SCFD1-215ENST00000555259 PRSS54Q6PEW0 395 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 SLC25A38Q96DW6 304 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 GNPNAT1Q96EK6 184 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-215ENST00000555259 ABHD1Q96SE0 405 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 MRPS16Q9Y3D3 137 aaKnown RBP6.63□□□□□ -1.35
SCFD1-215ENST00000555259 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 A0A0B4J293 547 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 A8MTW9 85 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 EBAG9O00559 213 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 PMP2P02689 132 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 AZU1P20160 251 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 ETV6P41212 452 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 HSPA13P48723 471 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 SFXN4Q6P4A7 337 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 AMTNQ6UX39 209 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 PRSS48Q7RTY5 328 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 FCGR1BQ92637 280 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 GPR146Q96CH1 333 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
SCFD1-215ENST00000555259 A0A0A6YYH2 397 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 A6NJ64 397 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 CRXO43186 299 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-215ENST00000555259 IGKV1-5P01602 117 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 DNAH10OSP0CZ25 163 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 S100GP29377 79 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 OR5H6Q8NGV6 325 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 RXFP4Q8TDU9 374 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 PDCD10Q9BUL8 212 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 IFT46Q9NQC8 304 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 DOK5Q9P104 306 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 RRP15Q9Y3B9 282 aaKnown RBP6.61□□□□□ -1.35
SCFD1-215ENST00000555259 A0A087WTM6 91 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 ISLRO14498 428 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 TOMM40O96008 361 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 INSP01308 110 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 P0C879 139 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 RD3LP0DJH9 198 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 SLC25A4P12235 298 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 M6PRP20645 277 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 GCSHP23434 173 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 PSMB9P28065 219 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 TAS2R20P59543 309 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 B2MP61769 119 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 OR5I1Q13606 314 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 OR51G1Q8NGK1 321 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 OR5H2Q8NGV7 314 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 ENY2Q9NPA8 101 aa6.61□□□□□ -1.35
SCFD1-215ENST00000555259 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 A0A0J9YY99 117 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 M0R2Z0 102 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 NXPH3O95157 252 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 PSG1P11464 419 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 ELK1P19419 428 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 NUP62P37198 522 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-215ENST00000555259 SCAND1P57086 179 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 TAS2R46P59540 309 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 TBCEQ15813 527 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-215ENST00000555259 SPINK13Q1W4C9 94 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 LPCAT3Q6P1A2 487 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 RNF125Q96EQ8 232 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 C20orf173Q96LM9 149 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 DIABLOQ9NR28 239 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 RPRMQ9NS64 109 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 ANAPC10Q9UM13 185 aa6.6□□□□□ -1.35
SCFD1-215ENST00000555259 HTR2BP41595 481 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 AKR1C2P52895 323 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 BAP18Q8IXM2 172 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 OR11H7Q8NGC8 314 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 RNASEH2CQ8TDP1 164 aaKnown RBP6.59□□□□□ -1.35
SCFD1-215ENST00000555259 NPIPB3Q92617 1050 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 PBDC1Q9BVG4 233 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 TXNL4BQ9NX01 149 aaKnown RBP6.59□□□□□ -1.35
SCFD1-215ENST00000555259 PFDN2Q9UHV9 154 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 TIMM8BQ9Y5J9 83 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-215ENST00000555259 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
SCFD1-215ENST00000555259 ZNF701M0R085 212 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-215ENST00000555259 NAT1P18440 290 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 HOXA5P20719 270 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 HRH1P35367 487 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
SCFD1-215ENST00000555259 SUPT4H1P63272 117 aaKnown RBP6.58□□□□□ -1.36
SCFD1-215ENST00000555259 OR8G2PQ6IF36 304 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 ACY3Q96HD9 319 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 TMEM70Q9BUB7 260 aa6.58□□□□□ -1.36
SCFD1-215ENST00000555259 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
SCFD1-215ENST00000555259 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 H3BNG1 76 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 SIVA1O15304 175 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 C2orf83Q53S99 150 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 C1orf194Q5T5A4 169 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms