RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MYLKQ15746 1914 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 UQCRHLA0A096LP55 91 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 A0A1W2PQD3 144 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 PRORSD1PA6NEY8 169 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 BBIP1A8MTZ0 92 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 C5orf58C9J3I9 102 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ADAP1O75689 374 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR2J2O76002 312 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 CRHP06850 196 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 IL3P08700 152 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLC25A16P16260 332 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 DSCR4P56555 118 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 CLDN12P56749 244 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 LINC00313P59037 77 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 COPZ1P61923 177 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 RPL38P63173 70 aaKnown RBP2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 PLCXD2Q0VAA5 305 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 FADDQ13158 208 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 KRTAP21-3Q3LHN1 58 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 COQ5Q5HYK3 327 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 LCN8Q6JVE9 175 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 C5orf46Q6UWT4 87 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF767PQ75MW2 155 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ARPINQ7Z6K5 226 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR11H1Q8NG94 326 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 CDC26Q8NHZ8 85 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 LZICQ8WZA0 190 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 PSMF1Q92530 271 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZHX1-C8orf76Q96EF9 292 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 TBX5Q99593 518 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 DOHHQ9BU89 302 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLC22A4Q9H015 551 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 EFCAB1Q9HAE3 211 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 FAM206AQ9NX38 181 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 HHLA2Q9UM44 414 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLC35A3Q9Y2D2 325 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 NDUFAF1Q9Y375 327 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 RYR1P21817 5038 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ESPL1Q14674 2120 aa2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF106Q9H2Y7 1883 aaKnown RBP2.35□□□□□ -2.03
CKS1BP1-201ENST00000555221 CSMD1Q96PZ7 3565 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 A0A096LPI6 279 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 TRGV5A0A0B4J1U4 118 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 C17orf51A8MQB3 221 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 UBFD1O14562 309 aaKnown RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR2T1O43869 369 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 DCTN3O75935 186 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ATP5HO75947 161 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 STATHP02808 62 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 DBIP07108 87 aaKnown RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 BLVRBP30043 206 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 GUCA1AP43080 201 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 POLR2JP52435 117 aaKnown RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 EBPQ15125 230 aaKnown RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF791Q3KP31 576 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ARHGAP11BQ3KRB8 267 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF550Q7Z398 422 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR52R1Q8NGF1 315 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR10D3Q8NH80 312 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 TSLPQ969D9 159 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ROPN1LQ96C74 230 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 CCDC115Q96NT0 180 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 HOPXQ9BPY8 73 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR51B6Q9H340 312 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 POLR3HQ9Y535 204 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 ITPR2Q14571 2701 aa2.34□□□□□ -2.03
CKS1BP1-201ENST00000555221 USP9YO00507 2555 aaPredicted RBP2.34□□□□□ -2.04
CKS1BP1-201ENST00000555221 MDC1Q14676 2089 aaKnown RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SCN8AQ9UQD0 1980 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 IGLV3-32A0A0A0MS00 114 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TRAV8-1A0A0A6YYK1 113 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 IGHV3-73A0A0B4J1V6 119 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TRGV4A0A0C4DH28 118 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 A0A0G2JND7 137 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 GRIFINA4D1Z8 144 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 ODF3BA8MYP8 253 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 EDF1O60869 148 aaKnown RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 LY6HO94772 140 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 HMGN2P05204 90 aaKnown RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 ESDP10768 282 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 CA7P43166 264 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SMIM11AP58511 58 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 NCALDP61601 193 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 ZCCHC23Q6ZST2 131 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAM19A5Q7Z5A7 132 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TMBIM1Q969X1 311 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SMIM19Q96E16 107 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SLC35G5Q96KT7 338 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 PACRGQ96M98 296 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TTTY12Q9BZ98 90 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 TPT1P8Q9HAU6 139 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 EMC3Q9P0I2 261 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 DKKL1Q9UK85 242 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms