RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 C15orf65H3BRN8 121 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 HIST1H1EP10412 219 aaKnown RBP7.21□□□□□ -1.25
SYNE2-217ENST00000555022 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 OR2V2Q96R30 315 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 SLC25A33Q9BSK2 321 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 MAP1LC3CQ9BXW4 147 aa7.21□□□□□ -1.25
SYNE2-217ENST00000555022 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-217ENST00000555022 SP1P08047 785 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 GUSBP1Q15486 140 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 TIMM23BQ5SRD1 257 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 FAM120AOSQ5T036 256 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 FER1L6-AS1Q8NA97 138 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 PRSS3P2Q8NHM4 247 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 DEFB104AQ8WTQ1 72 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 COMMD5Q9GZQ3 224 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 SPRR3Q9UBC9 169 aa7.21□□□□□ -1.26
SYNE2-217ENST00000555022 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-217ENST00000555022 COL8A1P27658 744 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 HBBP68871 147 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 TPSG1Q9NRR2 321 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 CCL3L1P16619 93 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 GCSHP23434 173 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 FCER1GP30273 86 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 CFHR2P36980 270 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 IL11RAQ14626 422 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 MSMPQ1L6U9 139 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 ZNF766Q5HY98 468 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 PCP2Q8IVA1 136 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 SRSF12Q8WXF0 261 aaKnown RBP7.2□□□□□ -1.26
SYNE2-217ENST00000555022 H1FXQ92522 213 aaKnown RBP7.2□□□□□ -1.26
SYNE2-217ENST00000555022 HARBI1Q96MB7 349 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 PRO3102Q9H379 93 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 TEX50A0A1B0GTY4 177 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 SS18L1O75177 396 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-217ENST00000555022 CECR9P0C854 216 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 CACNG7P62955 275 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 C6orf15Q6UXA7 325 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-217ENST00000555022 PDPNQ86YL7 162 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 GRAMD2BQ96HH9 432 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 CXXC4Q9H2H0 198 aa7.2□□□□□ -1.26
SYNE2-217ENST00000555022 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 LYZP61626 148 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 OR1L4Q8NGR5 311 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 TTC28Q96AY4 2481 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 MRPL20Q9BYC9 149 aaKnown RBP7.19□□□□□ -1.26
SYNE2-217ENST00000555022 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 ACACAQ13085 2346 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 IGKV3D-15A0A087WSY6 115 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 M0R1B8 84 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 PLP1P60201 277 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 SRSF6Q13247 344 aaKnown RBP7.19□□□□□ -1.26
SYNE2-217ENST00000555022 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 TMEM97Q5BJF2 176 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 PATE2Q6UY27 113 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 C12orf54Q6X4T0 127 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 FA2HQ7L5A8 372 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 C5orf17Q8NAS9 161 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 FAM167A-AS1Q96KT0 104 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 PTPRZ1P23471 2315 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-217ENST00000555022 ZZEF1O43149 2961 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 DSCAMO60469 2012 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 C21orf140B9A014 251 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 J3QW42 95 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 PNKDQ8N490 385 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 TXNDC17Q9BRA2 123 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 LINC00470Q9BZP3 86 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 C1RLQ9NZP8 487 aa7.19□□□□□ -1.26
SYNE2-217ENST00000555022 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
SYNE2-217ENST00000555022 MRPS17Q9Y2R5 130 aaKnown RBP7.19□□□□□ -1.26
SYNE2-217ENST00000555022 SLC25A17O43808 307 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 IFI27P40305 119 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-217ENST00000555022 SPCS1Q9Y6A9 102 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 ADAMTS20P59510 1910 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 ASH1LQ9NR48 2969 aaKnown RBP7.18□□□□□ -1.26
SYNE2-217ENST00000555022 TRGV5A0A0B4J1U4 118 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 IGHV3-35A0A0C4DH35 117 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 ADH4P08319 380 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 OR10AG1Q8NH19 301 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 RPP21Q9H633 154 aaKnown RBP7.18□□□□□ -1.26
SYNE2-217ENST00000555022 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
SYNE2-217ENST00000555022 RPUSD1Q9UJJ7 312 aaKnown RBP7.18□□□□□ -1.26
SYNE2-217ENST00000555022 APC2O95996 2303 aa7.18□□□□□ -1.26
SYNE2-217ENST00000555022 A8MWL6 223 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 PPBPP02775 128 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
SYNE2-217ENST00000555022 LOXL3P58215 753 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 CCL8P80075 99 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 IGFL4Q6B9Z1 124 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 GCSAMQ8N6F7 178 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 C17orf77Q96MU5 243 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 ST20Q9HBF5 79 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 CEP192Q8TEP8 1941 aa7.17□□□□□ -1.26
SYNE2-217ENST00000555022 A0A0G2JLM5 398 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms