RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 PUS1Q9Y606 427 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYNE2-215ENST00000554997 WI2-2373I1.2A0A1W2PRP0 233 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 OVOL1O14753 267 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 AGPAT2O15120 278 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 YIF1AO95070 293 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 CAMLGP49069 296 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 ELLP55199 621 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF266Q14584 549 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 UNQ9165/PRO28630Q6UXU0 137 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 TMEM182Q6ZP80 229 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-215ENST00000554997 CYP2G1PQ6ZSU1 146 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 OR51G1Q8NGK1 321 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 SCGB1C1Q8TD33 95 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 MGST2Q99735 147 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 WDR61Q9GZS3 305 aaKnown RBP7.79□□□□□ -1.16
SYNE2-215ENST00000554997 UFC1Q9Y3C8 167 aa7.79□□□□□ -1.16
SYNE2-215ENST00000554997 BORCS7-ASMTA0A0B4J1R7 106 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 UBE2L5PA0A1B0GUS4 154 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 JTBO76095 146 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 TSPAN15O95858 294 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 LINC00869P0C866 280 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 FGF7P21781 194 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 RPL29P47914 159 aaKnown RBP7.78□□□□□ -1.16
SYNE2-215ENST00000554997 IL34Q6ZMJ4 242 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 TMUB2Q71RG4 321 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 BPIFCQ8NFQ6 507 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 OR9G4Q8NGQ1 327 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 RCC1LQ96I51 464 aaKnown RBP7.78□□□□□ -1.16
SYNE2-215ENST00000554997 ARPC5LQ9BPX5 153 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 CYTL1Q9NRR1 136 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
SYNE2-215ENST00000554997 A8MWP6 167 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 IL4P05112 153 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 C8orf88P0DMB2 117 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 NPPCP23582 126 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 GATA2P23769 480 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PLP1P60201 277 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR20EP86478 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR20CP86479 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR20DP86480 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR20BP86481 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR20AP86496 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 TM4SF20Q53R12 229 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PRR31Q5SQ13 230 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 PXDC1Q5TGL8 231 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 RPL7L1Q6DKI1 246 aaKnown RBP7.77□□□□□ -1.17
SYNE2-215ENST00000554997 Q6ZRG5 221 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 ZNF709Q8N972 641 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 RNF125Q96EQ8 232 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 GINS3Q9BRX5 216 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 C20orf24Q9BUV8 137 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 ELOVL1Q9BW60 279 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 GGTLC1Q9BX51 225 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 ARL6Q9H0F7 186 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 DAZ1Q9NQZ3 744 aaKnown RBP7.77□□□□□ -1.17
SYNE2-215ENST00000554997 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
SYNE2-215ENST00000554997 MRPL27Q9P0M9 148 aaKnown RBP7.77□□□□□ -1.17
SYNE2-215ENST00000554997 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 KANTRA0A1W2PQU2 76 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 C2orf70A6NJV1 201 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 HYPMO75409 117 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 CSN3P07498 182 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 CBLN1P23435 193 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 CRYBB3P26998 211 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 OPCMLQ14982 345 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 USF2Q15853 346 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-215ENST00000554997 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 LAMTOR1Q6IAA8 161 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 C9orf62Q8N4C0 152 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 MARC2Q969Z3 335 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 MCRIP2Q9BUT9 160 aaKnown RBP7.76□□□□□ -1.17
SYNE2-215ENST00000554997 ARV1Q9H2C2 271 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 DNAJC4Q9NNZ3 241 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 SLC39A9Q9NUM3 307 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 PFDN2Q9UHV9 154 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 TIMM9Q9Y5J7 89 aa7.76□□□□□ -1.17
SYNE2-215ENST00000554997 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-215ENST00000554997 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 BCL2L11O43521 198 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 FOLR2P14207 255 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 ORM2P19652 201 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 CD33P20138 364 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 C4BPBP20851 252 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 S100A7P31151 101 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 B2MP61769 119 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 ADAMTSL5Q6ZMM2 481 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 PPP1R14BQ96C90 147 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 GNPNAT1Q96EK6 184 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-215ENST00000554997 METTL26Q96S19 204 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 RSG1Q9BU20 258 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 KCNIP2Q9NS61 270 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 PXMP4Q9Y6I8 212 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms