RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DAZ1Q9NQZ3 744 aaKnown RBP12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 SIGLEC8Q9NYZ4 499 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 A0A0D9SG52 128 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 YIF1AO95070 293 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 ZNF90Q03938 601 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 MARC2Q969Z3 335 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 RCC1LQ96I51 464 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
SPTLC2-203ENST00000554901 AGPAT2O15120 278 aa12.54□□□□□ -0.4
SPTLC2-203ENST00000554901 CAMLGP49069 296 aa12.54□□□□□ -0.4
SPTLC2-203ENST00000554901 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
SPTLC2-203ENST00000554901 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
SPTLC2-203ENST00000554901 SLC45A2Q9UMX9 530 aa12.54□□□□□ -0.4
SPTLC2-203ENST00000554901 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 FGF7P21781 194 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 INSL3P51460 131 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 SCGB1C1Q8TD33 95 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 RNF125Q96EQ8 232 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 MGST2Q99735 147 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 C20orf24Q9BUV8 137 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 GPR61Q9BZJ8 451 aa12.53□□□□□ -0.4
SPTLC2-203ENST00000554901 TMEM213A2RRL7 107 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 IL4P05112 153 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 OPCMLQ14982 345 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 GGTLC1Q9BX51 225 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 WFDC1Q9HC57 220 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.4
SPTLC2-203ENST00000554901 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 C8orf88P0DMB2 117 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 S100A7P31151 101 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 BMI1P35226 326 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 PLP1P60201 277 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 ZNF709Q8N972 641 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 METTL26Q96S19 204 aa12.52□□□□□ -0.41
SPTLC2-203ENST00000554901 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 SEC14L6B5MCN3 397 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PFDN1O60925 122 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 JTBO76095 146 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 CSN3P07498 182 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 CXCL2P19875 107 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 CBLN1P23435 193 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 NPPCP23582 126 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PRR20EP86478 221 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PRR20CP86479 221 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PRR20DP86480 221 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PRR20BP86481 221 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 PRR20AP86496 221 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 CD300CQ08708 224 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 S100A7AQ86SG5 101 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 ARPC5LQ9BPX5 153 aa12.51□□□□□ -0.41
SPTLC2-203ENST00000554901 WIPF1O43516 503 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 LINC00869P0C866 280 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 FOLR2P14207 255 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 CRYBB3P26998 211 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 LYZP61626 148 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 USF2Q15853 346 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 Q6ZRG5 221 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 NARS2Q96I59 477 aaKnown RBP12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
SPTLC2-203ENST00000554901 PKD1L1Q8TDX9 2849 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 IGHV7-4-1A0A0J9YVY3 117 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 A0A1W2PS18 150 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 STPG3Q8N7X2 389 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 TMEM231Q9H6L2 316 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 SLC39A9Q9NUM3 307 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 SMPXQ9UHP9 88 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
SPTLC2-203ENST00000554901 IGHV3OR16-8A0A075B7F1 116 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 ELOA3CA0A087WX78 387 aaPredicted RBP12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 BCL2L11O43521 198 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 HYPMO75409 117 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 SAP30O75446 220 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 CD5P06127 495 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 B2MP61769 119 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 TMUB2Q71RG4 321 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 RNF24Q9Y225 148 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms