RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FAM90A26D6RGX4 464 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 AZU1P20160 251 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 CDSNQ15517 529 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 C17orf58Q2M2W7 97 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 CCL19Q99731 98 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 CDC42EP3Q9UKI2 254 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 ESDP10768 282 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 MYOD1P15172 320 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 NAV2Q8IVL1 2488 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 LHBP01229 141 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 LYL1P12980 280 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 CD1BP29016 333 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 OR4C13Q8NGP0 309 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 LYPD6BQ8NI32 183 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 A0A087X0K7 114 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 F2Z2F3 143 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 HIST1H1EP10412 219 aaKnown RBP13.53□□□□□ -0.24
PCNX1-209ENST00000554879 COX6B1P14854 86 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 MC5RP33032 325 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 ACSM6Q6P461 480 aa13.53□□□□□ -0.24
PCNX1-209ENST00000554879 TMEM50AO95807 157 aa13.52□□□□□ -0.24
PCNX1-209ENST00000554879 TAF15Q92804 592 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCNX1-209ENST00000554879 TMEM133Q9H2Q1 129 aa13.52□□□□□ -0.24
PCNX1-209ENST00000554879 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.24
PCNX1-209ENST00000554879 MCRIP2Q9BUT9 160 aaKnown RBP13.52□□□□□ -0.25
PCNX1-209ENST00000554879 GNB4Q9HAV0 340 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 F2RL2O00254 374 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 CA2P00918 260 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 APCSP02743 223 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 PPBPP02775 128 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 CITED1Q99966 193 aa13.52□□□□□ -0.25
PCNX1-209ENST00000554879 A0A1B0GW64 132 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 A6NDN8 102 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 OR4C46A6NHA9 309 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 TRAV26-1A0A087WT03 109 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 TEX43Q6ZNM6 134 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 FAM222BQ8WU58 562 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 TMEM8BA6NDV4 472 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
PCNX1-209ENST00000554879 IGKV1-16P04430 117 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 FABP2P12104 132 aa13.51□□□□□ -0.25
PCNX1-209ENST00000554879 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
PCNX1-209ENST00000554879 UBE2G1P62253 170 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
PCNX1-209ENST00000554879 PRORYQ9H606 182 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 CTSZQ9UBR2 303 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
PCNX1-209ENST00000554879 CTXND1A0A1B0GTU2 59 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 IGHV1-8P0DP01 117 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 KCNIP2Q9NS61 270 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 JKAMPQ9P055 326 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.5□□□□□ -0.25
PCNX1-209ENST00000554879 TRAV9-2A0A087WT02 112 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 KLRD1Q13241 179 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 TMEM177Q53S58 311 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 TEX36Q5VZQ5 186 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
PCNX1-209ENST00000554879 ARHGAP32A7KAX9 2087 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 ATP5G3P48201 142 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 ZNF525Q8N782 197 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 ZNF48Q96MX3 618 aaPredicted RBP13.49□□□□□ -0.25
PCNX1-209ENST00000554879 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 TNFRSF19Q9NS68 423 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 LOXP28300 417 aaPredicted RBP13.49□□□□□ -0.25
PCNX1-209ENST00000554879 GNG4P50150 75 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 EFNB3Q15768 340 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 C10orf55Q5SWW7 151 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 OR2K2Q8NGT1 345 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
PCNX1-209ENST00000554879 F11RQ9Y624 299 aaKnown RBP13.49□□□□□ -0.25
PCNX1-209ENST00000554879 SERTM2A0A1B0GWG4 89 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
PCNX1-209ENST00000554879 MFAP2P55001 183 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 C19orf35Q6ZS72 473 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 TMEM250H0YL14 139 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 LOXL3P58215 753 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 TFF3Q07654 80 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 UTF1Q5T230 341 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 RBP4P02753 201 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 GPX1P07203 203 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 MIC13Q5XKP0 118 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 POLQO75417 2590 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 IL15RAQ13261 267 aa13.48□□□□□ -0.25
PCNX1-209ENST00000554879 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
PCNX1-209ENST00000554879 SERF2P84101 59 aa13.47□□□□□ -0.25
PCNX1-209ENST00000554879 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
PCNX1-209ENST00000554879 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
PCNX1-209ENST00000554879 FOXA3P55318 350 aaPredicted RBP13.47□□□□□ -0.25
PCNX1-209ENST00000554879 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
PCNX1-209ENST00000554879 SLC25A48Q6ZT89 311 aaKnown RBP13.47□□□□□ -0.25
PCNX1-209ENST00000554879 C5orf17Q8NAS9 161 aa13.47□□□□□ -0.25
PCNX1-209ENST00000554879 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
PCNX1-209ENST00000554879 IGHV2-26A0A0B4J1V2 119 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms