RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 NPSP0C0P6 89 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PRR20EP86478 221 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PRR20CP86479 221 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PRR20DP86480 221 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PRR20BP86481 221 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PRR20AP86496 221 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 GOLT1AQ6ZVE7 132 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 LINC01560Q8TB33 94 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 DIRC2Q96SL1 478 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 CSMD1Q96PZ7 3565 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 BMPR1BO00238 502 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 P01737 135 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
XRCC3-208ENST00000554811 ZNF788Q6ZQV5 615 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 DDB2Q92466 427 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 RPEQ96AT9 228 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 ZNF503Q96F45 646 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 VPS25Q9BRG1 176 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 C17orf100A8MU93 164 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 ABHD17AQ96GS6 310 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 PPP1R14DQ9NXH3 145 aa9.61□□□□□ -0.87
XRCC3-208ENST00000554811 TNRC6BQ9UPQ9 1833 aaKnown RBP9.61□□□□□ -0.87
XRCC3-208ENST00000554811 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 A0A1W2PS18 150 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 GPX1P07203 203 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 RPL27AP46776 148 aaKnown RBP9.6□□□□□ -0.87
XRCC3-208ENST00000554811 SLC25A48Q6ZT89 311 aaKnown RBP9.6□□□□□ -0.87
XRCC3-208ENST00000554811 LOXL4Q96JB6 756 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 H0YJW9 148 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 HLA-DQA1P01909 254 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 TDGF1P3P51864 188 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 WASHC3Q9Y3C0 194 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 PRSS46E5RG02 174 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 SIAH2O43255 324 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
XRCC3-208ENST00000554811 NBEAP1P0C6P0 100 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 CX3CL1P78423 397 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 ADIPOQQ15848 244 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 KCNS1Q96KK3 526 aa9.6□□□□□ -0.87
XRCC3-208ENST00000554811 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 NCBP2LA6PVI3 153 aaKnown RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 FXYD7P58549 80 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 TBR1Q16650 682 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 TPTE2P1Q5T6R2 138 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 NUP35Q8NFH5 326 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 A0A1W2PPI3 338 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 HYPMO75409 117 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 PDLIM4P50479 330 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 YPEL3P61236 119 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 RNF2Q99496 336 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 SLC25A2Q9BXI2 301 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 LINC00312Q9Y6C7 94 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 MBD3L4A6NDZ8 208 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 MBD3L3A6NE82 208 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 MBD3L5A6NJ08 208 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 HTR1DP28221 377 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 ARF6P62330 175 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 MBD3L2Q8NHZ7 208 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-208ENST00000554811 VSTM2AQ8TAG5 236 aa9.59□□□□□ -0.87
XRCC3-208ENST00000554811 A0A0G2JNJ9 132 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 LINC00310P59036 64 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 OSR1Q8TAX0 266 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-208ENST00000554811 TMEM208Q9BTX3 173 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 Q9UFV3 132 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 C9JCJ5 164 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
XRCC3-208ENST00000554811 PPOXP50336 477 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 RUSC1-AS1Q66K80 236 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 PERPQ96FX8 193 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 MT-ND6P03923 174 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 VAMP3Q15836 100 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 UNQ5815/PRO19632Q6UWF5 114 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
XRCC3-208ENST00000554811 USP9YO00507 2555 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-208ENST00000554811 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 WFDC3Q8IUB2 231 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 PNKDQ8N490 385 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 BEND2Q8NDZ0 799 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 CLEC7AQ9BXN2 247 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 OSTCQ9NRP0 149 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 FAM90A9PA6NNJ1 464 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 MUC15Q8N387 334 aa9.57□□□□□ -0.88
XRCC3-208ENST00000554811 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms